Results
… Leveraging massive comparative genomics to decode millions of mystery genes and lay a … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations … Berkeley National Laboratory, is committed to advancing genomics in support of DOE Office of Science Biological and …
Learn more
… of communication by chemical means, of survival by providing deterrence and rendering some organisms just … for culturing, and then of course using modern phylogenetic tools measuring genes, the 16S gene, and comparing it with … in the process. We now have cell pellets. And we’re pulling genomic DNA out of those cell pellets. So, we’re about ready …
Learn more
… technology in order to enhance the quality of single-cell genomes and directly link functional information with … the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal analytical … activity (BONCAT+FACS). To provide additional functional insights into microbial genomes, the JGI now uses laser …
Learn more
… of Sample QC Sample Quality and Contamination JGI’s Genomic DNA Sample QC Protocol JGI’s Total RNA Sample QC … Sample metadata is collected via spreadsheet or entered into a web interface prior to shipping samples to the JGI. … Project Manager (PM) a list of organism names (or for metagenomes, sample names). Need help naming your organisms? …
Learn more
… changes. Summary Researchers have been utilizing metagenomics as a way to study a collection of hard-to-culture … samples. The work aligns with the ETOP mission of providing JGI users with the most current technology and … from complex metagenomes than any of the single binning tools alone,” primarily because of its capacity to harness …
Learn more
… represents the JGI user community and is responsible for providing input and advice on JGI policies and practices …
Learn more
… professionals to explore opportunities in STEM by providing hands-on learning opportunities and ultimately, an …
Learn more
… small genes assembled to less than 5kb in length, cloned into vector of choice Glycerol stock of sequence verified … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) … based on feasibility and scientific merit. Arizona Genomics Institute will produce HMW DNA needed for these …
Learn more
… submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating Collaborations for User … to drought stress resilience: RNA-seq and metabolomic insights in lignin biosynthetic pathway edited populus … CSP Functional Genomics Submission …
Learn more
… of Energy Office of Science National User Facilities into their research. In recognition of the increasingly … provides customized analysis, the JGI also participates in publication of results. … JGI scientists as needed), and the work plan is written into a Statement of Work document. …
Learn more
… work we’ve determined that the ANMG deposits those bacteria into the jelly coat of the eggs. And so these eggs are laid … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … to do some really exciting work on figuring out how to get genomic sequencing data for the fungus garden because it’s …
Learn more
… marine natural products chemist, Richard Moore, and get into seaweed, robots, algae, and biocatalysis — and he makes … But anyway, here’s our conversation with one of my favorite human beings, Brad Moore. — Dan: How do I introduce you, … the mid-late ’80s. And at that time, you know, it’s before genomics existed. This is before we’re even thinking of …
Learn more

