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Strain Engineering
The focus of this group, in recent years, has been to bring … to no genetic tools enabling heterologous expression and functional exploration.  The developed strains represent an additional phase of user-accessible project types, in which DNA-based …
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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring … the JGI to focus on expanding molecular capabilities and functional genomics, scaling capacity through end-to-end … cell genomics, DNA synthesis, and metabolomics.   … Deputy of Genomic Technologies …
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Environmental Genomics Group
… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … Dariia et al. (2023)  A standardized quantitative analysis strategy for stable isotope probing metagenomics … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Survey of Setaria's natural diversity reveals seed dispersal in … a very high quality reference S. viridis genome sequence. Analysis of these plant genome sequences also led researchers to identify a gene related to seed dispersal in wild populations for the first …
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David Goodstein
… to the Human Genome Project, he began developing larger comparative genomic systems as the JGI’s eukaryote research … Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom. … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… sojae, which imperils soybean harvests. The subsequent comparative analysis of these two pathogens, led by the JGI and Virginia … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a …
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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … and actually get to the DNA sequence – sequences for the genes that code for the proteins that produce secondary … People wanted to understand what those were and how related they were to primary metabolism, and, as we …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings together … industry, and government organizations for three days of scientific presentation, interactive panel discussions, …
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Frequently Asked Questions: Proposal Submission
… proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New … accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s … the JGI? … If I have ongoing research funding to carry out functional studies using the proposed sequencing data, …
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Meeting Code of Conduct
All participants and staff of the JGI events are required to adhere to the following Code of Conduct. Event organizers will enforce this Code … they seem inconsequential. During this event or any of its related events, no participant should engage in harassment …
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Denoising inferred functional association networks obtained by gene fusion analysis
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Comparative genomic analysis reveals evidence of two novel Vibrio species closely related to V. cholerae
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