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Enlarging Windows into Understanding Gene Functions
… in sequences affect traits. In a text file, the rows of letters A, T, C and G appearing over and over in a dizzying array of combinations, are unremarkable, save perhaps for the absence of all the other letters of the alphabet. … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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Sequencing Technologies & Products
… well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. This includes scaling the technologies and enabling state-of-the-art sample processing and … An assay used for profiling transcription factor binding …
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JGI-TMF Critical Minerals and Materials Call
… The joint Critical Minerals and Materials call represents a unique opportunity for researchers to request the capabilities and expertise of … provides customized analysis, the JGI also participates in publication of results. Go here for additionial information, …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … so secondary metabolism is throughout nature, except maybe for animals and humans, not as much. You know, we have this … Episode Transcript … continues a conversation from the first episode . You can go to part 3 here . You can find the podcast on  Apple ,  …
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Natural Prodcast Episode 8: Eric Schmidt
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … of secondary metabolism.  DAN: Hey there and welcome back for Episode 8 of Natural Prodcast. This week, we have our … Episode Transcript … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …
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Frequently Asked Questions: Project Management
… Eukaryotic projects: Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA Synthesis … You can visit the Products & Offerings section of our website for more details, including a downloadable pdf of products …
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Micro-Scale Applications Group
… Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of … microfluidics/microdroplet technology in order to enhance the quality of single-cell genomes and directly link functional information with individual cells. Research Team    …
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FICUS Overview
… The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 to encourage and enable researchers to more easily integrate the … provides customized analysis, the JGI also participates in publication of results. … facilities, who consider technical feasibility and readiness to begin work.  During scientific peer review, …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative Genomics Building in Berkeley, California.  Our location at the IGB fosters team science and …
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User Programs
… For accepted proposals, sequencing, synthesis, metabolomics … and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user …   Learn more about our individual calls and other opportunities to work with the JGI …
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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct and model gene regulatory pathways used by the filamentous … We acknowledge the use of deletion strains generated by Grant P01 GM-068087 “Functional Analysis of a Model …
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DAP-seq Drives Robust Mapping of Gene Regulation
… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    … advancement holds the potential to expand opportunities for bioenergy and bioengineering applications. “We worked … that flip genetic switches — bind DNA were limited to a few model species and involved slow, labor-intensive …
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