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Marine Microbe Contains Multitudes
… and colleagues set sail on research cruises in 2015 and 2016. At Station ALOHA , site of the 30-years-long Hawaii … they have used the sequence of a “marker gene,” namely the 16S ribosomal RNA (rRNA) gene, to mark or identify microbial … Facility, is supported under contract number DE-AC02-05CH11231. This work is a contribution of the Simons …
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Busting the Unbreakable Lignin
… (MAO), Institute for Collaborative Biotechnologies grants W911NF-09–D-0001 and W911NF-19-2-0026 (MAO), US Army Research Office contract …
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Digging into Microbial Ecosystems Deep Underground
National Laboratory. Letters of Intent are due March 16, 2022 to freely access resources at multiple DOE user …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
Los Alamos National Lab researchers investigated Chromosome 16, which contains about 3% of the human genome. They wanted … sequence and analysis of duplication-rich human chromosome 16 . Nature. 432, 988–994 (2004). doi:10.1038/nature03187 …
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Boosting Small Molecule Production in Super “Soup”
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… will help solve energy and environmental challenges. In 2009, researchers at the JGI and the Bigelow Laboratory for … microbial populations in oxygen minimum zones identified SAR11 bacteria as initiators of nitrogen loss in these waters. …
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Trent Northen
… across genotypes and environments. 2024 Nature Sci Data. 11, 339. https://doi.org/10.1038/s41597-024-03069-7  … through standardized fabricated ecosystems. Nature Methods (16), 567–571 (2019) doi: 10.1038/s41592-019-0465-0. … Award 2014 DOE Early Career Award 2013 R&D100 Award 2009 Presidential Award for Science and Engineering (PECASE) …
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Tracing the Evolution of Shiitake Mushrooms
… atmospheric carbon dioxide.  Summary Researchers sequenced 11 samples from Asia–Australasia and 13 samples from the … by the NSF awards DEB- 1456588 to D.H. and DEB-1442113 to A.R., the Department of Energy award 0000238431 to … Science and Innovation to P.F., and the NIH award R56AI146096 to A.R. J.L.S. and A.R. were supported by the HHMI and …
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Fungus Fuels Tree Growth
States Department of Energy under contract DE-AC02-05CH11231. Support was also provided by the NSF Zygolife … on the Biology of Tree and Forest Ecosystems (ARBRE) (ANR-11-LABX 0002 01 to F. Martin), JGI Community sequencing program project (CSP570, DE-AC02-05CH11231), and National Science Foundation (concept ID …
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Microbiome Data Science Team
… of new viral genomes and their predicted hosts (Nature 2016, Science 2017, Nature Microbiology 2018), discovery of … of Earth’s microbiomes. Nature Biotechnol . 39(4):499-509. Danko D. et al. (2021) A global metagenomic map of urban … the human gut microbiome. Nature Biotechnol.  39(1):105-114. Schulz F, et al. (2020) Giant virus diversity and host …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
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What Happens Underground Influences Global Nutrient Cycles
… and the  DOE Joint Genome Institute (JGI)—have selected 11 proposals for support from 53 received through a joint …
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