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Fungal Friends or Foes in Plant Roots
… toward filling gaps on the fungal Tree of Life through the 1000 Fungal Genomes Project. Hacquard’s group had assembled … populations around Europe. The JGI sequenced and annotated 41 fungal isolates from the collection. The team then … Grigoriev , the paper is an “excellent example” of how a 1000 Fungal Genomes project can enable studies of plant root …
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From Competition to Cooperation
… across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry … root cells) lineages. To learn why, researchers analyzed 135 fungal genomes representing major fungal families, … U.S. Department of Energy under Contract No. DE-AC02-05CH11231 within the framework of the Mycorrhizal Genomics …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… for the next five years. It also includes more than 130 implementation milestones to help track and drive … path, has previously proven successful; in the 2018-2023 five-year strategic plan, the JGI accomplished 90% …
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Events
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Mindfully Moving JGI
… to the heart of the Berkeley Lab campus. By Friday, October 18, the production sequencing labs in Building 100 were silent. Twenty years after the JGI united the … heart of the Berkeley Lab main campus. On Monday, November 11, a week after they’d been  moved to Berkeley , two of the …
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Crysten Blaby-Haas
… She earned her PhD in Microbiology and Cell Science in 2011 from the University of Florida, working with Valérie de … and reverse genetics to test those hypotheses. From 2011 – 2015, she worked with Sabeeha Merchant at UCLA as a NIH … Peter-Boyer Postdoctoral Award for Research Excellence, 2015 34th Annual Women’s Recognition Award for Science, 2020 …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… the virus had been infecting the cell. The team assembled 130 genomes from their sample — a small proportion of the … mat, the virus-to-host ratio for most pairs was close to 1. Even the most abundant virus was only 11 times more abundant than its host. There just don’t seem …
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Forming Scientific Connections and Building Community
… The 11th cohort of JGI-UC Merced interns pick highlights from … Malmstrom, Nandita Nath & W. Berkeley Kauffman Project: “ 16s Sequencing of Barcoded Microbial Genomes ” Morgan …
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2024 Progress Report
… 2,456 — had active proposals with us, along with more than 15,000 secondary users who made use of our data. We completed 39,870 projects in FY24 We generated 871 Terabases of sequence We synthesized 9.7 Megabases of DNA We processed 13,700 metabolomics samples With our users, 247 publications …
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The Expanding Universe of Methane Metabolisms in Archaea
… metabolisms is “vastly underestimated.” In the March 4, 2019, issue of Nature Microbiology , they mined the Integrated … by the other study co-authors, and reconstructed from these 10 metagenome-assembled genomes (MAGs) representing new … Symposium and for the JGI Annual Meeting closes on March 11, 2019. Novel Yellowstone archaeon belongs to Korarchaeota …
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JGI Welcomes New UEC Members
… career stages. The election period concluded on October 21. The results are in and JGI extends a warm welcome to the …
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JGI Announces 2025 New Investigator Portfolio
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