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Making a Lichen Together
… For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership more clearly. The Science The humble lichen is a … being that is actually comprised of two (or more) participants. One is a fungus (usually belonging to the …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… The Science Fern genomes are huge, and incredibly complex — making it difficult to grasp a deeper understanding of fundamental aspects of fern biology and, more broadly, land plant evolution. Recent findings in … metabolites and associated genes are great resources for bioremediation, new agricultural applications or …
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A Model System for Perennial Grasses
… U.S. Department of Energy (DOE) supports research programs for developing methods for converting plant biomass into sustainable fuels for cars and jets. By … for P. hallii towards stress tolerance improvement in its more complex relative, the candidate bioenergy crop, …
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Partnerships: Myco-Ed
… The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based … Students collect fungi, sterilize tissue, isolate genes and more. The metadata then goes into iNaturalist. Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ …
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CSP Large Scale Call
… genomic science projects that address biological functions for biomanufacturing, critical minerals and materials, … inter-organismal interactions, and predictive biology, modeling and biodesign — questions of relevance to DOE’s … All proposals will be externally peer-reviewed for scientific merit, DOE mission relevance, proposed data …
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Triggering Morel Fruiting
… DOE Office of Science User Facility,  reported on just how morel fruiting is triggered when nutrients are acquired from … Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the following guest … carbon from lignocellulosic-abundant matters such as plant litter and to incorporate the assimilated carbon into …
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How to Submit Sequencing Samples
… of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … the steps outlined below. Click the drop-downs to learn more about each step in the process. If you have any … quantity and quality has been the rate-limiting step for many projects at the JGI. The quality of the starting …
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Single Cell Research Group
… material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from … genomes are critical to serve as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic … as purely based on annotation may not be sufficient. A more recent effort in the Woyke lab is therefore focused on …
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Tour the IGB
… the frontiers of environmental and energy genomics.  For more information about the science depicted, click here . <span data-mce-type="bookmark" style="display: inline-block; …
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User Advisory Committees
… to establish with our stakeholders. The guiding principles for participating on JGI Advisory Committees are outlined in … The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and practices … on the Institute’s strategic, scientific, technical, informatics, management, and operational objectives. Serving …
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Frequently Asked Questions: Project Management
… can visit the Products & Offerings section of our website for more details, including a downloadable pdf of products … come from the user community. Find out about JGI’s calls for proposals , and submit your proposal online using the Work Initiation Process (WIP) interface.    For commonly asked questions about JGI’s proposal calls and …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… As SIP experiments shed more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted … datasets, JGI researchers and users are looking for ways of making these experiments more repeatable and reproducible. … some of the most pressing challenges of our time. For more information, please visit  …
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