Search

… performance computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( KBase ) integrates systems … missions, and to expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call for … and analyses available to the community at large. In most cases where the JGI provides more customized analysis, the …

… … DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues the series of interviews we recorded at … a sliver of the molecules nature provides to us. But in my lab, we like to ask questions about what don’t we know about … that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, oh Alison …

Our interns say their experiences allowed them to:  Learn new skills. Experience industry-level work and coding. … Receive mentorship, network and gain connections with lab staff. Increase their technical skills and confidence in …

Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between … symbiotic interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  Recently , researchers …

They are abundant representatives of deep subsurface ecosystems. A team of researchers described how the viruses … by combining a study of microbial communities (metagenomics) and a chemical labelling approach. The Impact … Their genomes include short DNA sequences that code for CRISPR systems, which help bacteria resist foreign genetic …

… quantitative analysis strategy for stable isotope probing metagenomics . mSystems , e01280-22. 10.1128/msystems.01280-22 Clum, A. et … Eloe-Fadrosh, Emiley A. et al. (2016)  Metagenomics uncovers gaps in amplicon-based detection of …

… sample and project metadata, and to access JGI tools and systems. … Go to the “ edit contacts ” page in your account. … These materials should be obtained by contacting the collaborator listed on the “info” page for that organism on the … the User Agreement? … How do I obtain a JGI login? … I have new contact information. How can I update my JGI account? … …

… on plants and microbes, Trent Northen’s group at Berkeley Lab created a fabricated ecosystem – an EcoFAB. These small … College to see EcoFABs in action in Jill Bouchard’s BIO 21 lab course. …

… the process. They noted this may be the first publicly available, river-focused microbial resource that provides … to the community level. The Impact Rivers are transport systems, and their health is heavily reliant on the energy … predictive watershed scale models to manage river ecosystems. One application for the information is the …

… immersed in not only their work, but the opportunity to collaborate with and learn from fellow researchers onsite as …

Interns say their experiences allowed them to:  Learn new skills. Experience industry-level work and coding. Receive mentorship, network and connect with Lab staff. Increase their technical skills and confidence in …