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To provide broad plant genomic capabilities, the DOE Joint … which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … roles to genes. Sarah:  How many plants did you all look at? Avinash: We started off with 12 plants, which …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … know! When I was thinking about this story I tried to go look that up and I couldn’t find the answer, so it’s not …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the … work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of Energy Joint Genome Institute, builds …

… poplar trees and their microbial partners. The Science To help better understand how ecosystems work and how healthy they are, a recent data set  … data set will help identify how different elements of the ecosystem interact and respond to changes in the …

… have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and … registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … Primary metabolism, cell activity, and fungal development looked quite alike for each guild of saprotrophs, …

… “Microbes underpin so much of what we see on earth in terms of nutrient cycles and … communities deep underground, and before the pandemic, they took the JGI on a sampling field trip. One of the questions they’re looking at: the role viral infection may play in other …

Over the course of eight weeks this past summer, 10 students from UC Merced … with JGI scientists on research projects that contribute to the larger mission of the U.S. Department of Energy. … Sidharth Babu (undergraduate) Mentor: Zhong Wang Click the image to watch the video … Intern: Brendan Blasius …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the … genomics of fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative …

On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and other institutions shared their … with 86 participants in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA … insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … cut his hair because it was too long. Well, when we went looking for a photo of John, we found one from the 70s in …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … but forming those concepts of what natural product studies look like. And so, I enjoyed your talk today. It was another …

… call represents a unique opportunity for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … they must utilize a broad range of the capabilities across at least two of the facilities, and generate datasets …