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Natural Prodcast Episode 17: Cassandra Quave
… people aspects of things, because a lot of what we do at JGI in terms of the sequencing that we do is very … bioprospecting that is often done, where we’re really just looking at DNA sequences, and we don’t always know … is I really try to find experts that are able to take it beyond that initial screen because I am not an expert in …
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User Programs
… For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.  … Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical Minerals and Materials Status CLOSED CLOSED …
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Natural Prodcast Episode 15: Katherine Duncan
… got Kate here today, and we wanted to talk to her about a whole list of things. So we have a Scripps background shared … since starting my own group is these tools, in terms of looking at the chemistry produced by microbes, they’re … you have a question, or want to give us feedback, tweet us @JGI or to me @danudwary. That’s D-A-N U-D-W-A-R-Y. If you …
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CalTeach
… CalTeach is a program for undergraduate majors interested in developing a deep understanding of STEM teaching & learning. Their …   Internship Snapshots   …
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Natural Prodcast Episode 23: Aaron Puri
… natural products chemistry, and he has a project with the JGI to synthesize the genes for and explore the chemistry of … went to group meeting and came back and it was just so fun looking at this as someone who had a bit more of a chemistry … sometimes you can be out of luck right or it could be a whole grad student thesis to synthesize a 13C-labeled …
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley … stakeholders. The guiding principles for participating on JGI Advisory Committees are outlined in this Code of Conduct. … The UEC represents the JGI user community and is responsible for providing input …
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JGI@25: Roots of a Mutualist Relationship
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … sequence of a mycorrhizal fungus shifted the focus from looking at single organisms to applying a broader ecosystem … (INRAE). Today, there are nearly 200 mycorrhizal fungal genomes publicly available on the fungal portal MycoCosm, …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The … Biosciences Institute, the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Understanding the evolution of polyploidy, and how genomes respond to extra chromosome and gene copies, will …
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CSP Functional Genomics
… genomics research and to help them translate genomic information into biological function.  The emphasis is on projects leveraging JGI’s DNA synthesis and ‘omics capabilities to enhance … without the capabilities and expertise available at the JGI. Proposals to this call may be submitted to the JGI at …
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The JGI Data Portal: Improving User Experience
… The human-centered, agile collaboration between the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download experience accessible … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Learning to Look
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an … are filamentous viruses with small, single-stranded DNA genomes and a unique chronic infection cycle. “We’re not … affiliated with the Inoviridae. “What we’re really doing is looking for a particular gene found in all inoviruses, and …
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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the … growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient acquisition and communication. … algae and plants. These compounds are key to organisms' interactions with their environments and with each other, …
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