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Natural Prodcast Episode 15: Katherine Duncan
… I think it must’ve been about 2001, maybe, and so it was before smartphones and before laptops and everything. And I … And as a result, there’s been a lot of work on open pond systems and infrastructure and growing microalgae. And to … and that are PhD students. And I think it’s a really nice model. I’d like to see more of this. It’s their ideas. So, …
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John Vogel
… he served as a Research Molecular Biologist at the USDA for 12 years where he was a driving force behind the … adoption of Brachypodium distachyon as an experimental model for the grasses. In addition to this fundamental work, he … Links to experimental resources and background information are available here . …
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Large‐scale maps of variable infection efficiencies in aquatic Bacteroidetes phage‐host model systems
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Environmental Genomics Group
… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and … to a better understanding of microbial communities and ecosystem function.  The Environmental Genomics group also …
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JGI Portals
… engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data … discoverability and accessibility are critical requirements for amplifying the JGI’s impact. Data generated from a single investment will be reused for further science.  Notices Data Portal files will be …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of … (PNAS). Switchgrass, Panicum virgatum , is a widespread, perennial grass in North America that has been the target of … of genomic, quantitative genetic, landscape, and niche modeling approaches, we contrasted the diversity of 4X and …
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Natural Prodcast Episode 17: Cassandra Quave
… Dan Udwary: Hey everybody! Welcome back for Natural Prodcast episode 17. The guest we have this week … born with a lot of different birth defects of my skeletal system. So I was missing bones and I had to have a lot of … there wasn’t much infrastructure available, especially to researchers just starting out as they’re trying to form …
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A novel open-source cultivation system helps establish the first full cycle chemosynthetic symbiosis model system involving the giant ciliate Zoothamnium niveum
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Salt tolerance of two perennial grass Brachypodium sylvaticum accessions
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Tracking the ancestry of known and ‘ghost’ homeologous subgenomes in model grass Brachypodium polyploids
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Jeremy Schmutz
… with the JGI dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha Institute for Biotechnology. There he constructed the pipelines for … of molecular responses to natural drought stress in Panicum hallii . Nature Communications 9: 5213. Huang, P et al. …
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Quantitative genetic-by-soil microbiome interactions in a perennial grass affect functional traits
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