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A Collaboration to Improve Plant Genome Annotations Across Species
… Biotechnology, which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha … led a team that  recently published work on the JGI Plant Gene Atlas in  Nucleic Acids Research . The project spans 15 … expression groups, differential expression, co-expression network analysis, and ortholog function descriptions from …
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FICUS
… the capabilities across at least two of the facilities, and generate datasets beyond what each of these facilities could generate by itself.   Accepted projects must address or be … JGI and EMSL Omics Tools introduces the NEON resource, a network of field research sites designed to collect …
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Natural Prodcast Episode 19: Bill Fenical
… local marine environment. I went out and picked up marine plants, I picked up animals. And I asked the simple … the most effective application, of marine molecules in general. DAN UDWARY: Maybe can you explain to our audience … that really looked promising. We found that there were new genera, these basic taxonomic group called the genus. We …
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Evolution and expression of core SWI/SNF genes in red algae
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a recent  Nature Genetics paper , researchers focused on the full composition …
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Uncovering secondary metabolite evolution and biosynthesis using gene cluster networks and genetic dereplication
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Pleiotropic and Epistatic Network-Based Discovery: Integrated Networks for Target Gene Discovery
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Denoising inferred functional association networks obtained by gene fusion analysis
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Natural Prodcast Episode 4: Nancy Keller
… After I got my undergraduate degree, which was in general biology, I joined the Peace Corps. And when I was … or natural product called T-toxin. And this kills corn plants. So I became very interested in toxins – phytotoxins … looking at that I’m a very visual person. So, when we make genetic mutants in a fungal isolate, I can see something …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… Antarctic algae need their vitamins; zinc fuels some of their most … peering into the function and activity of phytoplankton genes and looking at how communities of these microalgae … for primary metabolism such as photosynthesis and gene regulation.  Mock and his team then linked those …
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Natural Prodcast Episode 12: Nadine Ziemert
… of it. So it wasn’t only chemistry or only biochemistry or genetics. It was also ecology. It was also evolution. It was … what we have to do more is really figure out more about regulation and when they’re really produced. Then we can … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to …
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Stage-resolved gene regulatory network analysis reveals developmental reprogramming and genes with robust stem-preferred expression in sorghum
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