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Gallionellaceae in rice root plaque: metabolic roles in iron oxidation, nutrient cycling, and plant interactions.
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Complete genome sequence of the sulfur compounds oxidizing chemolithoautotroph Sulfuricurvum kujiense type strain (YK-1T)
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Natural Prodcast Episode 2: The Primer, Part 2
… through the stories I told you about geosmin, which is a bacterial sacred metabolite, and ergot alkaloids come from … there. And then, you know, they will have to create an environment that’s good for them to grow in. They might have … different stages of growth or different signals from the environment might cause you to start producing things. Yeah.  …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… a method that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and … microbiome. In work  reported in  Applied and Environmental Microbiology , the researchers engineered root … bacterial strains as part of the Community Science Program (CSP)  Functional Genomics proposal call. …
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Bioavailable iron titrations reveal oceanic Synechococcus ecotypes optimized for different iron availabilities
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Pumping iron: A multi-omics analysis of two extremophilic algae reveals iron economy management
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Contrasting Pathways for Anaerobic Methane Oxidation in Gulf of Mexico Cold Seep Sediments
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Natural Prodcast Episode 11: Marnix Medema
… on synthetic biology of engineering gene expression in bacteria – however, the professor was actually quite … And then they wanted so to look at secondary metabolism in bacteria. And what I get intrigued by was that the project … And the acceleration of genome sequencing, especially in bacteria, has been enormous. There are now hundreds of …
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Diversity and evolution of nitric oxide reduction in bacteria and archaea.
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… described in this webinar only offered through the CSP Functional Genomics call? A(nswer): It’s also possible … capabilities in other calls such as the  annual large-scale CSP call or through the  “Facilities Integrating … review to consider the biosecurity, biosafety, and environmental aspects of the proposals. Upon approval from JGI …
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Natural Prodcast Episode 6: Marc Chevrette
… presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] He’s also a really good friend of mine. I … communicate and oftentimes how they remain fit in their environments.  ALISON: Okay, cool. Thank you for that picture. … So, one of those is Acinetibacter . This is a genus of bacteria that’s really popped up at funding agencies and the …
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Streamlining Regulon Identification in Bacteria
… particularly sigma factors that initiate transcription in bacteria. Using this technology, which combines an in vitro … genes vital for growth and survival across various environments are expressed when their functions are needed. … expand the known transcriptional regulatory network in bacteria, enabling the discovery of regulatory cascades as …
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