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Open Frameworks Training the Next Generation of Scientists
… program for higher education that develops skills in fungal biology and genomics.  Myco-Ed :  The Mycological Curriculum for Education and Discovery is a microbiology program that provides training and scientific … (JGI), a DOE Office of Science User Facility, and the DOE Systems Biology Knowledgebase (KBase). The JGI and KBase are …
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Linking soil biology and chemistry in biological soil crust using isolate exometabolomics
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Natural Prodcast Episode 5: Brad Moore
… discoveries being made, and then connecting that to biology was pretty darn exciting. So that was this era of … wanted to be true to my roots, and always work with marine systems because that’s just where my innate curiosity and … pretty exciting. But everyone was working with terrestrial systems. No one was, at that time, really working with …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… to find are medicines. Medicine has always been the main driver for secondary metabolism drug discovery. Because we … can be found in Yu et al, APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 1253–1262, 70:3 ALISON TAKEMURA: And so did … peptides, remember, are big, complicated enzyme systems that really just exist to pull an amino acid out of …
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Natural Prodcast Episode 16: Marcy Balunas
… As much as we incorporate loads of different kinds of biology, one of the best things that we do is work with this … to that and what you guys do when you’re exploring your systems. Because I think the JGI has a little bit of a … massive data into really interesting ways to look at our systems. And so we’ve done quite a bit of work figuring out …
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Droplet microfluidics for synthetic biology
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A standard-enabled workflow for synthetic biology.
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Biology of Fungi and Their Bacterial Endosymbionts
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Environmental distribution and population biology of Candidatus Accumulibacter, a primary agent of biological phosphorus removal
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Natural Prodcast Episode 4: Nancy Keller
… hear which we recorded at the Society for Industrial Microbiology’s Natural Products conference, which took place a … challenges were associated with getting good transformation systems going. That has a lot to do with, well, the fact … genome, I guess, and the way DNA is activated. The promoter systems are different. We don’t have operons. It’s just …
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Decomposing a San Francisco estuary microbiome using long-read metagenomics reveals species- and strain-level dominance from picoeukaryotes to viruses
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Natural Prodcast Episode 23: Aaron Puri
… the genes for and explore the chemistry of quorum sensing systems, specifically the acyl homoserine lactones.  If you … lot of people would consider more straightforward chemical biology, a lot of which people classify as tool building. So … gas. And oftentimes people’s mind go right to anaerobic ecosystems. But these are actually– so methane– biologically …
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