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… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent … 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science …

… brands can’t exist without cocoa According to the  International Cocoa Organization (ICCO), global cocoa bean production … will be cocoa for chocolate tomorrow In 2010, a draft first genome of  Theobroma cacao  – the tree that produces cacao … released by a Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled …

… curator there, with a broad range of experimental work on plants for drug discovery in antibiotics, anticancer, and … that is often done, where we’re really just looking at DNA sequences, and we don’t always know necessarily or pay … it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of …

… possible by mining the datasets in the Integrated Microbial Genomes and Microbiomes (IMG/M) suite of tools managed by … Institute (JGI), a DOE Office of Science User Facility. The sequences were then biochemically characterized by a team … to accurately edit genomes (that is, repair gene mutations, and either delete or add genes in a precise fashion) …

… The Micro-Scale Applications group explores the genetic makeup of natural microbial … technology in order to enhance the quality of single-cell genomes and directly link functional information with individual cells. Research Team    … internal analytical standards to accurately measure environmental microbiome activity levels.This functional assay …

… DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And … eight of these weird bacteria. And we proposed to the Joint Genome Institute. DAN UDWARY: Oh, that’s where we come in. …

… One of the JGI’s key assets is our user community, … who use JGI resources and expertise. These collaborations have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data life …

… Leveraging massive comparative genomics to decode millions of mystery genes and lay a future-ready foundation     … Researchers with the Department of Energy (DOE) Joint Genome Institute (JGI)’s Fungal and Algal Science Program … for prediction of fungal lifestyles based on genome sequences.” The Fungal Knowledge Gap The fungal kingdom …

… In honor of the JGI's 25th anniversary in 2022, we have … trace its origins, the researchers engaged the DOE Joint Genome Institute (JGI), with support of the US Department of … effort was to decode the complex Phytophthora ramorum genome. The JGI generated the organism’s DNA code in tandem …

… about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative analysis tools. … and not available for download. 9.  Q: Can I upload my own sequences? A: We can add external annotated fungal genomes, … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… An improved genome assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new reference … using advanced technologies to reconstruct the complete sequences of individual chromosomes. The team describes the … Borevitz) conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office …

… natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg … Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet plants and released a …