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… genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … sources of natural products, and have potential as biofuel feedstocks. Understanding the genetic underpinnings … Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley …

… that influence system behavior.  Through this identification, metabolomics enables functional genome annotation, improves understanding of the role small …

All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National … and the broader scientific community, and promotes communication and collaboration within the user community. … The … and strategic objectives of the microbial and metagenome programs. The committee serves as the program's key …

… lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … with plants (mycorrhizae), and particularly how fungi that feed on decaying plant matter (saprotrophs) have … symbiotic functions. Recently published in  Nature Communications , the work was led by a consortium of researchers …

… elements (MGEs) are genetic entities that seek to replicate themselves and spread from cell to cell. Two of the … Lead Nikos Kyrpides at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … been downloaded thousands of times, receiving excellent feedback from the general research community. It can be  …

For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … The Impact Lichens are a model for inter-kingdom communication and cooperation. Their partnership is widespread and … lichens. Studying the symbiosis by investigating a lichen’s genomes and transcriptomes could help inform efforts at …

… analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to … data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and understanding. JGI and …

… biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C Abergel, … (2022) Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature Reviews Microbiology … Hidden diversity of soil giant viruses. Nature Communications. 9 (1), 1-9 Schulz et al. (2017) Towards a balanced …

Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … cannot be cultivated under laboratory conditions, their genomes can’t be sequenced using traditional approaches. …

The Joint Genome Institute's DNA Synthesis Platform capabilities … for bioenergy, nutrient cycling and bioproduct applications.  The team has three subgroups: Synthetic Biology Lab : a user science group dedicated to user project design, assembly, and quality control …

… researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal … increasingly as the climate warms. However, these are complicated interactions to untangle. Fungi work in cooperation to … to trees; plant pathogens colonize living plants to feed on them.  Across the forest types, Martin and his team …