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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for … demonstrate the importance of proper nucleic acid quantification in our Illumina and PacBio sequencing workflows and … Weight DNA extraction and quality control (from PacBio) 2) Review guidelines detailing quantity and quality …
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Community ecology across bacteria, archaea and microbial eukaryotes in the sediment and seawater of coastal Puerto Nuevo, Baja California
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Metagenomic analysis of microbial consortium from natural crude oil that seeps into the marine ecosystem offshore Southern California
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Natural Prodcast Episode 18: A CSP Primer
… while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, … research, especially at US National Labs, like Lawrence Berkeley Lab (that’s LBL), the National Lab where JGI is located. And within the DOE is BER, which stands for …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But … ways. They have the capacity to kill outright, replicating so thoroughly that they lyse the cell — a process … in studying a microbial mat from Cone Pool in Mono County, California, scientists have used sequencing methods for the …
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Thermus sediminis sp. nov., a thiosulfate-oxidizing and arsenate-reducing organism isolated from Little Hot Creek in the Long Valley Caldera, California
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Gut Fungi: Unexpected Source of Novel Chemicals
The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest … A team led by Michelle O’Malley, a chemical engineer at the University of California (UC), Santa Barbara, collected the … Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory. More …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… didn’t really fully exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard … guide RNA library generation and development and its applications. “I moved to UC Davis in 2014,” recalled Philipp …
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Dealing with Drought: Uncovering Sorghum’s Secrets
Over 40 percent of the cereal crop’s genes respond to drought stress. The … is led by a consortium involving researchers from the University of California (UC), Berkeley, UC Agriculture and … Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley …
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Axel Visel
Programs, he focuses on the development and implementation of strategic initiatives at the JGI. Dr. Visel received his … led to the discovery of thousands of genetic switches implicated in developmental and disease processes in the human … Adjunct Professor at the School of Natural Sciences at the University of California, Merced. Dr. Visel also served as …
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Four principles to establish a universal virus taxonomy
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CSP Large Scale Call
… on genomic science projects that address sustainable biofuel and bioproducts production, leveraging systems-based approaches to unravel functional capabilities of plants, microbes and microbial communities, global carbon … and Environmental Research (BER) missions .  While applications will be accepted that address any aspect of these …
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