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Natural Prodcast Episode 16: Marcy Balunas
… do when you’re exploring your systems. Because I think the JGI has a little bit of a different approach. We don’t … a long time.  MARCY: It will. Are you going to solve it at JGI?  DAN: No.  [LAUGHING]  ALISON: Don’t shortchange JGI!  DAN: JGI is great, but we’re not solving that …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … laboratory — and rumen microbes are no exception. Back in 2011, JGI-supported researchers published a paper in the … these environmental samples,” said Matthias Hess, first author on the paper and now an associate professor and head …
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Sequencing Submission Requirements for DNA Synthesis
… When submitting sequences to the JGI DNA Synthesis program, please include the following …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… to the California gold rush. And we’ll talk about a new JGI paper that’s just come out where I got the chance to do … right, got it. And just thinking about it from I know the JGI perspective here at the Joint Genome Institute, because … this is Challis et al, Chemistry and Biology, 2000, 211-224, 7:3 And so, you can then make predictions about …
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SAR11 bacteria linked to ocean anoxia and nitrogen loss
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Diversity and biogeography of SAR11 bacteria from the Arctic Ocean
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JGI Scientists Pen Genome Watch Articles
… Tanja Woyke and other JGI researchers made their debut writing for the Nature … a model eukaryote. The wide array of topics comes from the authors’ interests, says Woyke. Their themes just need to … should be hot off the press. She tells prospective authors, “’Once you find a paper that you really like or are …
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Natural Prodcast Episode 5: Brad Moore
… first genome sequence with you. Brad: That’s right,  Dan: JGI did it in fact. Brad: That was a magical project I … Paul Jensen and Bill Fenical. And we connected to JGI through the Community Sequencing Program, and they … to look at a cousin organism from marine sediments. And so JGI was interested in that and they worked with us on that. …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … the researchers engaged the DOE Joint Genome Institute (JGI), with support of the US Department of Energy Office of … was to decode the complex Phytophthora ramorum genome. The JGI generated the organism’s DNA code in tandem with a …
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Workforce Development & Education Outreach
… Outreach at JGI takes many forms: We offer internship opportunities … opportunities and ultimately, an understanding of the JGI’s role in enabling complex biological and environmental … The JGI and UC Merced have had a long-standing internship … Modeled on the JGI-UC Merced internship program, a similar collaboration …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide … most pressing energy and environment challenges. The JGI offers these solutions to the worldwide scientific … of Covid-19 research (see his  2021 VEGA talk ). A global authority on viruses, Holmes was part of  the initial …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of … over 5 years, provides users with the genome browsers, gene pages, search, BLAST and BioMart data warehouse interfaces … genomes based on which version of Phytozome (e.g., 9, 10, 11, 12) they were first released in.  Are any genomes from …
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