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Creating an Energy Market for Miscanthus
… Miscanthus , an attractive addition to your garden and a potential fuel for the future. But, to be competitive in the …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… have been important in early Earth conditions. The Science Through a combination of sequencing tools and techniques applied to samples … (thermophilic) microbes are of interest for their potential use in number of biotechnological applications. … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office …
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iPHoP: A Matchmaker for Phages and their Hosts
… With metagenomic sequencing, researchers have found more of these viruses than ever before, in all kinds of ecosystems. However, matching these viral genetic … use a variety of approaches to match a virus with a potential host. This can result in different predictions. …
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Exploring the Diversity of the American Prairie’s Switchgrass
… A tall native plant of the North American prairie, switchgrass ( Panicum virgatum ) has long been a tantalizing potential biofuel feedstock. But switchgrass has a complex genome and, …
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Charting Progress toward Professional Goals
… from their summer experiences at the JGI Berkeley Lab offers a variety of programs to help inspire and train the … Deanna Beatty sat down with interns hosted at the JGI through three different internship programs – some managed … the project, like, I kind of knew that my projects were experimental and definitely wasn't. Of course, like, no …
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Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
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JGI@25: The Little Alga That Could
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference … a protein called RECQ3 helicase is entirely deleted, potentially resulting in many large mutations. And this is …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… for the triennium 2017-2020! Established by the University of Queensland in 1986, the van Niel Prize recognizes … unknown majority of microbes in, on and around the planet–through techniques including single-cell genomics and metagenomics. They cited her “landmark” 2013 Nature paper , …
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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The Science Enabled by … Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system … to predicting the ecosystem response to climate change. Through the CSP, researchers are aiming to have two high …
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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there, and welcome to the … be doing work in this field. So yeah, I thought we’d go through some of some of the background of the science and a …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … able to resolve the latter question, despite of their well-designed sampling and analysis of their data at the time. …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist … Roux , who was recently selected as the 2025 recipient of the Microbiome Data Prize by the American Society for … Metabolism in Model Soil Ecosystems,” uses a combination of experimental approaches and large-scale data analysis to …
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