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Shared Genomic Regions Between Derivatives of a Large Segregating Population of Maize Identified Using Bulked Segregant Analysis Sequencing and Traditional Linkage Analysis
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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex polysaccharides. Honey bees are invaluable pollinators — cupids of the plant world facilitating the remixing of genes in the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired … to functional genomics. Hear from five of the Summer 2019 interns, who briefly shared their experiences below. … of the internship, 4th year PhD student in Quantitative and Systems Biology Mentor: Guohong Wu, Plant Comparative …
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JGI Early Career Researchers Featured in mSystems Special Issue
… In a special issue of mSystems , out May 14, 2019, JGI researchers are among the … in soil for the first time. A second approach known as DNA stable isotope probing (DNA SIP) relies on incubating … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … that are still vital to facilitate the assembly of small DNA fragments into larger and coherent pieces called contigs … days and that are widely used by many, many scientists.”  Using samples of rumen-digested switchgrass, researchers …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… On July 8, JGI’s DNA Synthesis Science group held a  JGI Engagement: … really fully exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard … [DNA Synthesis Science Head] Yasuo [Yoshikuni] gave back in 2016.” Alper’s first approved JGI proposal came through the …
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The obligate alkalophilic soda‐lake fungus Sodiomyces alkalinus has shifted to a protein diet
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference … simpler (and smaller) models, Miscanthus has a large and complex genome whose evolutionary history and perennial … Innovation, which is supported by the U.S. Department of Energy, Office of Science, Office of Biological and …
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JGI Workshops at PAG
… Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With … sequence information to BER funded activities of plant systems. We will describe how to apply for a project with …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … Group Lead at the JGI.  To understand the microbiome systems underpinning a broad range of environmental … all over the world, including 3,908 isolate reference DNA viruses and 264,413 computationally identified viral …
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JGI Launches Latest Strategic Plan
… For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion nucleotide bases of DNA sequence to the public data repositories over its now …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… Congratulations to Susannah Tringe , one of eight scientists and engineers who received the 2020 Ernest Orlando Lawrence Award , one of DOE’s highest … director of Berkeley Lab’s Environmental Genomics and Systems Biology Division, and JGI’s deputy for user …
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