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… JGI data portals and pipelines helped identify potential genes responsible for lignin deconstruction. (The JGI also … structure and functionality on the atomic level, was generated at JBEI and analyzed by the GLBRC. By providing … will require further research, including confirming the genes and the enzymes those genes produce. If confirmed, and …

… stresses, and its transcriptome to learn more about which genes expression patterns. The analysis led to the … identification of several transcription factor regulating genes and enzymes that can modify composition of algal …

… 2007, the JGI has been working on identifying switchgrass genes related to biomass production, drought tolerance, and … data portal Phytozome. The combination of field data and genetic information has allowed the research team to … Switchgrass has a large polyploid genome, which means most genes are found as multiple copies across the chromosomes. …

… and a specific microbial host to replicate. Sequencing genetic material directly from samples sidesteps these … key aspect of viruses in the environment — their sheer genetic diversity. As pioneers of this field, the JGI has … genomes. That study multiplied the number of known viral genes by a factor of 16. The same year, the JGI expanded its …

… of Missouri said he and his colleagues had identified 1,110 genes involved in lipid metabolism.  “There’s still a lot of … progress had already been made positionally cloning genes involved in agronomic traits related to nutritional … “All along the way, it was just like rediscovering genetics, with the evolution of sequencing technologies and …

… each variety stores sugars and sequesters carbon. 2015: Epigenetic Control of Drought Tolerance in Sorghum (EPICON) … over 50 other diverse sorghum genomes. Deep sequencing and genetic linkage analysis improve the genome’s accuracy, and … team collect diverse lines of sorghum to understand what genes exist across the species. Earlier pan-genomes for …

… This year’s annual CSP call had five areas of emphasis: genes to function, plant and algal functional genomics, …

… annotating and analyzing the genome in order to find the genetic traits responsible for  P. trifoliata ’s hardiness, … Fred Gmitter, a UF/IFAS professor of citrus breeding genetics and longtime JGI collaborator, are senior authors … Journal.  this study included the discovery of candidate genes that confer resistance to citrus greening disease. …

… New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric … environments without oxygen through a process called methanogenesis. Methanogenic microorganisms therefore play a … thought to be the only microorganisms capable of methanogenesis —  it’s the metabolic process these little makers …

… to white rot fungi. Additionally, some of the saprotrophic genes found in the mycorrhizal species, such as nutrient … starting with the first mycorrhizal genome sequence generated by the JGI more than a decade ago. Having these …

… more than 8,500 publicly available metagenome datasets generated from sampling sites around the world, including … expanded 10-fold from just 205 genomes, redefining the phylogenetic tree of giant viruses. Metabolic Reprogramming a … provide short- and long-term impact on host metabolism in general, or on host populations impacted by adverse …

… conditions. They identified 511 new or recently discovered genera of bacteria and archaea. Many of the samples shared a high prevalence of genes involved in sulfur and nitrogen metabolism, as well as …