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Enrichment of root-associated Streptomyces strains in response to drought is driven by diverse functional traits and does not predict beneficial effects on plant growth
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2 interns in the summer of 2014 has grown to a total of 75 with the inclusion of the 2023 cohort. Each of them has … campuses with this being our largest and most successful one. It’s proven to be a really good model for us that we … Research Opportunity Center, echoed similar sentiments for the undergraduate interns. For him, it was a …
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Approved Proposals
… Click the cards below to view a downloadable pdf of accepted proposals from previous fiscal years …
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A Grass Model to Help Improve Giant Miscanthus
… plants are diploids with two copies of each chromosome, one inherited from each parent. Some plants, known as … wild Miscanthus lineages to better understand the genetic diversity of the grass, which could help in optimizing … studying genes that are turned “on” or “off” at different times and in different parts of the plant, the team …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… be engineered. “Piloting access to this emerging technology with JGI users will enable us to assess CRAGE’s impact, … can be used to create compounds more efficiently than one strain could on its own.  In work published in  … doubling the amount of DNA that can be inserted at a time. In a  project detailed in  ACS Synthetic Biology , …
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The Mutualist Laccaria bicolor Expresses a Core Gene Regulon During the Colonization of Diverse Host Plants and a Variable Regulon to Counteract Host-Specific Defenses.
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Diverse and unconventional methanogens, methanotrophs, and methylotrophs in metagenome-assembled genomes from subsurface sediments of the Slate River floodplain, Crested Butte, CO, USA.
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A User-Centered Approach to Accessing JGI Data
… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last year, … a structural shift in data access. Users were previously limited to accessing data sets within groups, such as plants (via Phytozome) or fungi ( … to address some of the most pressing challenges of our time. For more information, please visit  …
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Webinars on Offerings & Capabilities
… Below are a list of webinars that can help you through the submission process by better …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… year’s list features 6,849 individual researchers from 67 countries. Those from the JGI whose publications rank in … issue of Nature, the study highlights the vast functional diversity of microbes by looking at protein function within … ability to break down lignin , the hardiest of plant components and a key barrier when breaking down biomass. He was …
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Four Researchers Join JGI User Executive Committee
… at Michigan State University. He studies fungal biodiversity, ecology, and evolution, with a focus on … with both domesticated and wild animal and plant hosts. One main focus of his service to the community is in the … held an adjunct appointment at the JGI, during which time he led the development and initiation of the Genomic …
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Secreted Effector Proteins of the Poplar Leaf Spot and Stem Canker Pathogen Sphaerulina musiva Manipulate Plant Immunity and Contribute to Virulence in Diverse Ways.
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