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Applying Viral Genomics Expertise to Understanding the Human Virome
… tools and data repositories to two projects funded through the National Institutes of Health’s (NIH)  Common … in developing and maintaining the JGI’s  Integrated Microbial Genomics and Microbiomes (IMG/M) system. The … and understanding viral genomes and their interactions with microbial hosts. The second project, “ A consortium …
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Ian Blaby
… where he focused on functional genomics of phototrophs. Through this and post-doctoral positions at University of … Wales, Cardiff, Genetics Ph.D. – University of Cambridge., Microbial molecular biology Post-doctoral positions  – … one. 15: 11. 2020 Blaby & Cheng, Building a custom high-throughput platform at the Joint Genome Institute for DNA …
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Nigel Mouncey
… biology. Dr. Mouncey has a long-standing interest in microbial genetics that started with his education and …
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10 From JGI on the 2019 Highly Cited Researchers List
… Animal Science and Molecular Biology & Genetics categories Microbial Systems research group lead and User Programs Deputy Susannah Tringe, Cross-Field category Microbial Program head Tanja Woyke , Biology & Biochemistry …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… As SIP experiments shed more light on microbial communities than ever before — especially with the … opened vast windows into specific activities catalyzed by microbial communities. By pairing RNA or DNA sequencing with … SIP experiments. “I’m looking forward to seeing that come through, predicated on these data standardization efforts — …
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You Can Move, But You Can’t Hide
… user facility at Berkeley Lab. geNomad is now accessible through the National Microbiome Data Collaborative’s EDGE … in soils and water. MGEs like viruses and plasmids drive microbial processes and evolution. This is because MGEs can … from the general research community. It can be  downloaded through NERSC . …
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Expanding Virophage Diversity
… of known high quality virophage genome sequences 10-fold through computational approaches. By mining more than 14,000 … available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… to spring. These biodiversity hotspots harbor specialized microbial communities living in extreme conditions. The … diverse metabolic capabilities offer insights into how microbial processes might be harnessed for applications …
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Better Genome Editing for Bioenergy
… part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput gene-editing tool that can help scientists … of Science User Facility. Y. lipolytica is a tantalizing microbial factory, capable of turning abundant biomass …
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An Automated Tool for Assessing Virus Data Quality
… virus sequence fragments and data quality. The Science Through advances in sequencing technologies and … the genomes of these viruses and associate them with their microbial hosts. However, assembling viral genomes from … from IMG/VR , a database that is part of the Integrated Microbial Genomes & Microbiomes (IMG/M) suite, as well as …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… tested on a number of plants, including  genomes of cotton lineages and the  oilseed crop false flax – genomes that …
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A Grass Model to Help Improve Giant Miscanthus
… The team also sequenced genomes of numerous wild Miscanthus lineages to better understand the genetic diversity of the …
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