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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… For many scientists, the culmination of their work into a written … the most efficient at making proteins likely factors into why fungi have been so evolutionary and ecologically … applications, Wint also developed and tested a gene sequence-based predictor of gene expression levels using …
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A Step Toward Controlling Soybean Rust
… The United States  is the world’s leading soybean producer , and soybeans are used to produce biodiesel. … JGI Flagship plant genome , and JGI  published its genome sequence in 2010.       … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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The JGI Data Portal: Improving User Experience
… The human-centered, agile collaboration between the JGI and the information technology company … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence … View Fire Moss on the JGI Data Portal … Data Portal …
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, researchers have … of that machine — photosynthesizers’ DNA and RNA. These sequences provide a list of machine parts, and an idea of … the cell, Grosjean used the JGI-developed  guideRNA and Sequence Extraction Tool (gRNA-SeqRET) to produce knock-out …
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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US … program at Pacific Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established … This work was partially supported by awards from US Department of Energy … Researchers catalog the microbiome of U.S. rivers …
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Microbial Genomics & Metagenomics (MGM) Workshop
… Registration has closed.  The U.S. Department of Energy (DOE) Joint … workflows for computational analysis and interpretation of sequence data. IMG/M is a web-based platform that provides access to the wealth of public microbiome sequence data and enables the user to analyze these data …
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Marine algae and land plants share conserved phytochrome signaling systems
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Assemblathon 1: A competitive assessment of de novo short read assembly methods
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Recovery of genomes from metagenomes via a dereplication, aggregation and scoring strategy
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BLINK enables ultrafast tandem mass spectrometry cosine similarity scoring
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Perceptual and technical barriers in sharing and formatting metadata accompanying omics studies
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JGI Announces 2023 Community Science Program Awardees
… Congratulations to the proposers of the 19 proposals selected for the … a permafrost age gradient from the Fox permafrost tunnel near Fairbanks, Alaska. (Courtesy of Mary-Cathrine Leewis) … a permafrost age gradient from the Fox permafrost tunnel near Fairbanks, Alaska. (Courtesy of Mary-Cathrine Leewis) …
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