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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in … technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology advances in management, processing and … The research efforts of the group have concentrated in demonstrating the power of data science in tackling …
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Georg Rath
… Mr. Rath has been leading the Systems Infrastructure Team at the JGI since 2020. Before joining the JGI, he has been working …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… Novel archaeal lineage found in Yellowstone may have been important in early Earth conditions. The Science Through a combination of sequencing tools and techniques applied to samples … into the evolution of life on Earth. For decades, longtime JGI collaborator Bill Inskeep of Montana State University …
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Synthetic Biology Informatics Group
… Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program .  Representative software …
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Dan Rokhsar
… Dr. Rokhsar joined the JGI in 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed … AB in Physics, Princeton University, NJ MS in Theoretical … Cornell University, NY Postdoctoral scientist, IBM Watson Research Center, Yorktown Heights, NY …
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Partnering with CalTeach – Training the Next Generation STEM Workforce
… As set out in the JGI Five-Year Strategic Plan – “Beyond Basepairs, A Vision for Integrative and  Collaborative Genome Science” – through early …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such effort is … Phylogenetic diversity estimates show that the gap between cultivated and uncultivated Bacteria and Archaea has steadily been widening since 2005. This gap is also reflected in the strongly …
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A Mentor’s Perspective on Training the Next Generation
… Over the years, hundreds of interns have come to the JGI from all parts of the globe to … or another, they’ve all mentioned how invaluable their time at the JGI was and how great it was to have an experienced …
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Adopt-A-Genome
… In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. …
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Danielle Goudeau
… Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines custom flow cytometric analysis, …
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JGIota: Looking Back at Methane-Making Microbes
… We count on livestock for food and fiber, but raising these animals also produces an atmosphere-warming gas: methane. Those emissions mainly come … and archaea breaking down plant matter. So since 2010, the JGI has supported researchers studying those microbial …
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SIPs with Standards
… Stable Isotope Probing (SIP) is a powerful technique for studying microbial … show which microbes are handling specific nutrients, or what they're doing with those nutrients, and even how quickly. … catch: SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible …
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