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… for Biotechnology. Phytozome is the Plant Comparative Genomics portal of the Department of Energy Joint Genome … and facilitates accurate and insightful comparative genomics studies. …

… aim is identifying chemical compounds that could inhibit microbial methane production. Another effort is in using microbial understanding to formulate a vaccine for … with genomic DNA samples from Ruminococcus flavefaciens (XPD3002). With that sample, the Salk Institute team was able to …

… in a temperate forest filled with Norway spruce trees, and microbial activity teems beneath your feet. Both bacteria … to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from … fungal enzymes actually outnumbered bacterial enzymes 3-to-1. Additionally, the fungal enzymes the team found …

… The Integrative Genomics Building (IGB) seen above is home to the DOE Joint … secondary users who made use of our data. We completed 39,870 projects in FY24 We generated 871 Terabases of … sequence We synthesized 9.7 Megabases of DNA We processed 13,700 metabolomics samples With our users, 247 publications …

… Metagenome-assembled archaeal genomes provide new insights … issue of Nature Microbiology , they mined the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained … in April, which immediately precedes the JGI’s 14th Annual Genomics of Energy & Environment Meeting. Registration for …

… As SIP experiments shed more light on microbial communities than ever before — especially with the … easier to compare?” said Malmstrom, who worked with JGI Metagenome Program head Emiley Eloe-Fadrosh to host … this was the first workshop of its kind on SIP metagenomics,” Malmstrom said.  Increasingly, efforts like these …

… Using a novel computational approach, researchers confirm microbial diversity is wilder than ever. Imagine researchers … big the room is.  A new study  published online Oct. 11, 2023 in  Nature highlights the vast array of functional … (IMG/M) database, they successfully crafted the Novel Metagenome Protein Families (NMPF) Catalog.  “We can now …

… that led to the release of 52,515 publicly-available microbial draft genomes generated from environmental samples … to help researchers assess and improve the quality of metagenome-assembled viral genomes. The paper appeared in  … consortium, they  conducted a large-scale comparison of 135 fungal sequenced genomes to understand how plants and …