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Training the Next Generation of Talent
… New Graduate Internship Program Builds Bridges Between DOE JGI, UC Merced … JGI researcher, Zhong Wang, have adjunct faculty positions with the SNS, and Wang’s group was hosting another QSB … were directly assigned to the two of us just to get the structure set up and collect the first round of feedback …
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Jeremy Schmutz
… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was working for the … 19. Following the completion of the Human Genome Project in 2003, he developed sequencing, assembly, and improvement … to learn more about the program's areas of focus, major initiatives and more.  …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… Network (NEON) is a network of field research sites designed to collect long-term open access ecological data to better understand how U.S. ecosystems are changing.  Through the  “Facilities Integrating Collaborations … Additionally, researchers may also request access to the  Biological Small-Angle Neutron Scattering (Bio-SANS) …
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the norm when it comes to … 4031). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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Improving the Cacao Genome and Phytozome
… Global chocolate brands can’t exist without cocoa According to the  International Cocoa … used for systemic orthology to enable use for both cacao functional biology and breeding.     … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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An Integrated Dataset to Understand Ecosystem Interaction
… yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar trees and their … processes for the first time. By collecting data from 27 different poplar ( Populus trichocarpa ) trees, as well … revealed key metabolic pathways and metabolites associated with the tree’s stress response. Finally, using …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A … Department of Energy (DOE) Bioenergy Research Center, along with researchers from the Energy Biosciences Institute, the … This work was supported by the Energy Biosciences Institute and the DOE Center for Advanced Bioenergy and …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… 25th anniversary. Over the last year, we’ve been revisiting a number of notable achievements that showcase our … JGI user/collaborator Michelle O’Malley, a chemical and biological engineer at the University of California Santa Barbara. So plants don’t break down without a fight, but it’s an important battle to fine-tune. …
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Fungal Friends or Foes in Plant Roots
… Uncovering associations between plant roots and fungi that can help … genomes of fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their … analysis identified fungal gene families that help determine if these fungi act as friends or foes. The Impact …
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base … T or G in a genome sequence can lead to changes in protein structures and functions, but the DNA bases themselves can also be … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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You Can Move, But You Can’t Hide
… forms of MGEs are viruses and plasmids. They can be found in virtually all of Earth’s ecosystems. A software tool  … at Lawrence Berkeley National Laboratory (Berkeley Lab), with computing resources provided by NERSC, another user … data and access the geNomad tool to conduct their research. Designed to reduce the effects of taxonomic representation …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley … development to study active sites or single cells in their functional aqueous environment.  During the tours through … Biology (BSISB) Program for the characterization of biological processes was of high interest for the visitors, …
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