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A new view into a symbiosis could offer benefits to address climate change: pulling … understanding of this symbiosis could offer improvements in multiple directions. On the fungi side, underground … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …

… from The Ohio State University and the University of Michigan studying how virus infections cause significant … power of genomics and molecular characterization offered at multiple user facilities stewarded by the DOE’s Office of … was done by the JGI, and proteomics and metabolomics analysis and microscopy at EMSL. The team infected the …

… efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … spectrometry workflows for polar and nonpolar metabolite analysis, creation of large metabolite databases by running … Sci Rep. 2013;3: 1656. … Education … Selected Publications …

Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … that interested the authors was that an evolutionary analysis of  Bifidobacterium strains in honey bees and … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …

… viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome … metagenome-assembled viral genomes ( Nature Biotechnology , 2021), geNomad , a tool for identifying mobile genetic … University. The CODCC aims to coordinate data acquisition, analysis, and visualization through a sustainable, …

Mateus’s research is focusing on the identification and analysis of Mobile Genetic Elements from Metagenomic Data.  Mateus’s …

… data modeling, and biological data management. She was one of the co-authors and key developers of the Object-Protocol … P, Ritter SJ, Webb C et al. The IMG/M data management and analysis system v.7.0: content updates and new features. … in an Academic Setting, SSDBM 14, July 2014 … Selected Publications …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … we discussed in the primer podcasts ( part 1 here , part 2 here , and part 3 here ), which you should be able to find … Then you have to maybe improve some of your bioinformatic analysis. You don’t want to get clusters that are encoding …

Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission … transcriptomic atlas of acute stress response to low pH in multiple Issatchenkia orientalis strains., Microbial … … DNA Synthesis Science Program … Education … Selected Publications … Awards and Honors …

… to expression, scientists can now opt for various shades of grey. The ability to fine-tune the level of gene … to the results of the sugar-related tests, they pinpointed multiple genes that were previously missed in knock-out … User Facility, is supported under Contract No. DE-AC02-05CH11231. …

In honor of the JGI's 25th anniversary in 2022, we have revisited a … with the HudsonAlpha Institute for Biotechnology. Publications Grimwood, J., Gordon, L., Olsen, A. et al. The … J., Terry, A. et al. The DNA sequence and comparative analysis of human chromosome 5. Nature. 431, 268–274 (2004). …