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A One-Stop Shop for Analyzing Algal Genomes
… interactive browser that allows algal scientists and enthusiasts to look deep into more than 100 algal genomes, compare … tools created by JGI researchers, including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… to spring. These biodiversity hotspots harbor specialized microbial communities living in extreme conditions. The … study published in  The ISME Journal     focused on a class within  Chloroflexota called  Dehalococcoidia . Some  … diverse metabolic capabilities offer insights into how microbial processes might be harnessed for applications …
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10 From JGI on the 2019 Highly Cited Researchers List
… formerly the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly Cited Researchers , … Animal Science and Molecular Biology & Genetics categories Microbial Systems research group lead and User Programs Deputy Susannah Tringe, Cross-Field category Microbial Program head Tanja Woyke , Biology & Biochemistry …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… of the model plant  Marchantia polymorpha. Commonly known as liverwort, this was done to gain insights into gene families involved in … thus allowing them to spread across most of the plant’s ecosystems. The Impact For decades, the liverwort  M. …
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Maureen Berg
… our understanding of the roles that viruses play in their ecosystems, particularly in freshwater ecosystems. …
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An Automated Tool for Assessing Virus Data Quality
CheckV can help researchers assess virus sequence fragments and data quality. The … the genomes of these viruses and associate them with their microbial hosts. However, assembling viral genomes from … from IMG/VR , a database that is part of the Integrated Microbial Genomes & Microbiomes (IMG/M) suite, as well as …
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Better Genome Editing for Bioenergy
A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a … of Science User Facility. Y. lipolytica is a tantalizing microbial factory, capable of turning abundant biomass …
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Virus-Microbe Interactions of Mud Island Mangroves
… student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some of his research was conducted at the JGI through the DOE Office of Science … Rambo’s work was overseen by Susannah Tringe, head of the Microbial Systems group. He also worked with Simon Roux and …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
Merced. What started with 2 interns in the summer of 2014 has grown to a total of 75 with the inclusion of the 2023 cohort. Each of them has brought invaluable insights, thoughts, and explorations that has led to groundbreaking science and opportunities to speak …
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Adopt-A-Genome
… two students, Angela and Mark Soghomonian share what it was like to take on one of these genomes.  …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… in the Milky Way, viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the … in developing and maintaining the JGI’s  Integrated Microbial Genomics and Microbiomes (IMG/M) system. The … and understanding viral genomes and their interactions with microbial hosts. The second project, “ A consortium …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… the  Community Science Program (CSP) . This includes mass spectrometry-based measurements of primary and secondary metabolites from … Q:  Any advice on normalizing metabolomic data from a whole microbial community, without having cell counts or …
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