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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a … soil health. Summary Soil viruses are a reservoir of genetic diversity and capable of transferring genes from one host microbe to another, which can have a … the FICUS program to JEM and used resources at the DOE Joint Genome Institute (JGI) and the Environmental Molecular …
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The fungus that made itself at home
… Retracing how the dry rot Serpula lacrymans adapted to a new ecological habitat. The Science By comparing genetic information from similar organisms, researchers have … Due to its aggressive capacity to damage the wood in homes, bioenergy researchers have been interested in harnessing the …
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Game On: High School Students Drive Everglades Metagenomics Study
… In late June, Kathleen Lail, a member of JGI’s Sample … sampling in the Florida Everglades to help train the next generation of scientists. She shares her thoughts about the … analysis.  The class had to sift through over 55 billion genes and 16 trillion DNA bases of data, to figure out what …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… DNA Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting … the data had driven his lab’s focus on guide RNA library generation and development and its applications. “I moved to … by a consortium. The consortium looked at how different bioenergy relevant plants can produce species-specific …
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Mapping the Earth’s Hidden Fungal Kingdom
… Leveraging massive comparative genomics to decode millions of mystery genes and lay a future-ready foundation     Over the past … metabolites, and other parts lists for biotechnology, bioenergy and biomaterials,” said Igor Grigoriev, head of … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric … gas, regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called … — widening the avenues for exploring methane as a source of bioenergy, better understanding the global carbon cycle and …
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JGI Workshops at 33rd Fungal Genetics Conference
… the Edge of Pathogenicity" Workshop Steven Ahrendt presenting  Friday, March 20: JGI-EMSL Workshop: "Toward 10,000 …
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JGI Scientists Pen Genome Watch Articles
… Tanja Woyke and other JGI researchers made their debut writing for the Nature Reviews Microbiology column last year — and there’s more to come in 2020. Researchers at the U.S. Department of Energy (DOE) … and metagenome , rather than just by 16S ribosomal RNA gene censuses.  Emiley Eloe-Fadrosh ,  Metagenome Program …
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Cell by cell: population genetics in the wild
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Identification of mobile genetic elements with geNomad
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Microsatellite discovery from BAC end sequences and genetic mapping to anchor the soybean physical and genetic maps
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JGI & KBase at PAG XXVII
… XXVII Conference (PAG) takes place January 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology … Populus 8:03 PM Natural Diversity in  Setaria  and a Novel Gene for Shattering   In mid-2019, JGI and KBase will be …
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