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Extreme overall mushroom genome expansion in Mycena s.s. irrespective of plant hosts or substrate specializations.
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Phenotypic and genomic signatures of interspecies cooperation and conflict in naturally occurring isolates of a model plant symbiont
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Genetic mapping and prediction of flowering time and plant height in a maize Stiff Stalk MAGIC population
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Worldwide Population Genomics Reveal Long-Term Stability of the Mitochondrial Genome Architecture in a Keystone Marine Plant
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Integrating Experimentation with Data
…   Join the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) for “Empowering Automated … informed … The JGI and EMSL are U.S. Department of Energy (DOE) Office of Science national scientific user facilities …
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I-Min (Amy) Chen
Dr. I-Min A. Chen received her Ph.D. in Computer Science. Her research has been focused on semantic and object-oriented data modeling, and biological data … currently the Microbiome Computational Resource Lead at the JGI, responsible for the data management infrastructure of …
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Streamlining Regulon Identification in Bacteria
… transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on … is part of the mission of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving and applying a … and his team  announced in  Nature Microbiology an important addition to the synthetic biologist’s toolkit: a … select group of bacterial strains as part of the Community Science Program (CSP)  Functional Genomics proposal call. …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Grimwood heads the Library Construction group for the JGI Plant Program . Her collaborations with the JGI began … and the JGI. Building off this work, researchers at three DOE Bioenergy Research Centers (BRCs) have expanded the … viridis ). The team of researchers at the Danforth Plant Science Center (Danforth Center), HudsonAlpha and the JGI …
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Phylogenomic Analyses Indicate that Early Fungi Evolved Digesting Cell Walls of Algal Ancestors of Land Plants
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PEATmoss (Physcomitrella Expression Atlas Tool): a unified gene expression atlas for the model plant Physcomitrella patens
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Successional adaptive strategies revealed by correlating arbuscular mycorrhizal fungal abundance with host plant gene expression
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