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New Tricks with Old Bones
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Virus-Microbe Interactions of Mud Island Mangroves
… the opportunity to pursue part of their thesis research at one of the DOE national laboratories or national user facilities. Baker had worked with the JGI through a Community Science Program (CSP) … experience.” As he finalizes his dissertation, he noted his time with the JGI has shaped his post-graduate school plans. …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… JGI employs single-molecule, long-read DNA sequences to aid with genome assembly and transcriptome analysis of … is not part of the standard analysis pipeline but can be done on request by the PI. We currently use the ‘Base … are on our radar, but we don’t offer these at this time. Q:  How does the correction of the extended PacBio …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… .) This plan aligns the DOE Office of Science user facility with broader national efforts to promote and stimulate a … and environmental solutions, the JGI is well-positioned to provide users with capabilities to create … for bioproducts to support the bioeconomy. Functional diversity theme. Reading the genomes of individual organisms …
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From Competition to Cooperation
… able to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have … saprotrophs in the forest. White rot can break down the cellulose, hemicellulose, and lignin in plant cell walls, … were previously no genomes of symbiotic species available: 73 saprotrophs and 62 mycorrhizal species. The 62 …
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Building on Experience, With a Twist?
… The first time I did this internship in the summer of 2020, it was a time where the world literally stopped. …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… and more.  Microbes excel at recycling the abundant miscellanea of their surroundings. Case in point: for us, the smell of the ocean simply signals we’re near the beach. For bacteria, … in the biotechnology innovation ecosystem. “At JGI, we’ve done the synthesis, metagenome mining, all the way from …
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High functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plant
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Symbiotic Burkholderia Species Show Diverse Arrangements of nif/fix and nod Genes and Lack Typical High-Affinity Cytochrome cbb3 Oxidase Genes.
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Host population diversity as a driver of viral infection cycle in wild populations of green sulfur bacteria with long standing virus-host interactions
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Comparative Analyses of Four Reference Genomes Reveal Exceptional Diversity and Weak Linked Selection in the Yellow Monkeyflower (Mimulus guttatus) Complex
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Hyperdiverse, bioactive, and interaction-specific metabolites produced only in co-culture suggest diverse competitors may fuel secondary metabolism of xylarialean fungi.
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