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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship … University of California (UC), Merced. What started with 2 interns in the summer of 2014 has grown to a total of 75 with the inclusion of the …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… metagenome-assembled viral genomes ( Nature Biotechnology , 2021), geNomad , a tool for identifying mobile genetic elements ( Nature Biotechnology , 2024), and iPHoP , an integrated machine learning framework …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… More than 20 UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and Science Programs Deputy Axel … students summer research experience at the JGI. On July 26, 2018, the JGI celebrated the culmination of the fifth …
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Boosting Small Molecule Production in Super “Soup”
… to keep processes running smoothly. As reported August 26, 2021, in Nature Communications , researchers led by Hal Alper …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… are.” But according to a new study published September 16, 2021 in Nature Communications , warmer waters and communities … — a cool intermediate to the ocean’s extremes of about 28° and 97° Fahrenheit. “The study authors point to this …
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Boosting Small Molecule Production in Super “Soup”
… to keep processes running smoothly. As  reported August 26, 2021, in  Nature Communications , researchers led by Hal Alper …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… in Complex Systems (LRC) in Menlo Park, Calif. In the June 24, 2022, issue of the journal Science, Volland and colleagues, …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… version of a specific chemical, where ordinary Carbon-12 atoms are swapped for the heavier, non-radioactive isotope … of his lab, Abigayle Simpson. They found that although 20 years of SIP experiments have generated plenty of … for a SIP-focused workshop at the JGI in the fall of 2024. “ We wanted to get into the nitty gritty with the …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… conducted by JGI users. These datasets include an extensive 25-year study of microbial communities in freshwater … of high-quality contigs from diverse sources, derived from 219 Tb of raw environmental data. Trained on numerous … from large metagenome projects — ultimately assembling over 220 Tb of sequences and obtaining 700 Gb of assemblies. The …
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Game On: High School Students Drive Everglades Metagenomics Study
… her thoughts about the experience below. In the summer of 2018, Jonathan Benskin was preparing to teach a second year … Education (E4) community-building workshop at the  2019 Association for Environmental Studies and Sciences … partnership with Boca Raton Community High School. On June 26, 2019, the students gave a team presentation on how they …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… one constant for the Joint Genome Institute. On July 1, 2020, that all changed. Ray’s vigilant stewardship as JGI’s … one constant for the Joint Genome Institute. On July 1, 2020, that all changed. Ray’s vigilant stewardship as JGI’s …
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