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… And Trina McMahon's lab has been sampling the microbes of that lake for over 20 years, to understand how the freshwater … to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes are the …

… Registration has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics … Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and interpretation of sequence …

…   For years, researchers have known that many datasets miss a … Bagby (Case Western Reserve University) and Simon Roux (JGI) as they talk about their recent work on a time series …

… Back in 2011, JGI-supported researchers published a paper in the journal … metagenomics to identify over 27,000 microbial genes. The data from that study is now used across California State University campuses for biotechnology education …

… from Wisconsin’s Lake Mendota. In this episode: a look at the supercomputing that stitches together large datasets … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running smaller assemblies — so we head there for a sense of what this supercomputing looks like. …

… secondary metabolites, those molecules not essential for growth yet essential for survival, may now be easier to … (Clustered Regularly Interspaced Short Palindromic Repeats) is the leading tool for accurately editing genomes, its … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… other crops to grow well in worse conditions: with more heat, less water and less fertilizer. Grasses do better in these … Sun and Vladimir Torrres have looked into traits that could transfer from grasses into other crops.  One grass …

… from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, hone science presentation … in professional development enrichment activities. For some students in the 2021 cohort, this was their first … Polymorphisms Created by Transposable Elements …

… metagenomics studies. The Science Researchers demonstrated the value of conducting large-scale single cell … approaches including amplicon and metagenomic sequencing. For example, they showed that the composition of the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… living near hydrothermal deep-sea vents hold vast potential for bioenergy.   The Science Hydrothermal vents are ocean-floor openings in the Earth’s crust that emit hot, mineral-rich water. These vents are too deep in … the communities studied. The datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) …

… projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and integrating mathematics and chemistry for advanced analysis, modeling, … Fayetteville, Chemical Engineering Ph. D. – Arizona State University, Tempe, Chemical Engineering Post-doctoral …

… ancestral and present-day plants The Science In a recent  Nature Genetics paper , researchers focused on the full … to spread across most of the plant’s ecosystems. The Impact For decades, the liverwort  M. polymorpha has been used as a … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …