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A programmable droplet-based microfluidic device applied to multiparameter analysis of single microbes and microbial communities
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JGI Early Career Researchers Featured in mSystems Special Issue
… Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more targeted … method of traditional shotgun metagenomics. One approach uses fluorescence-activated cell sorting (FACS) to sort … Laboratory (Berkeley Lab). JGI is a DOE Office of Science user facility at Berkeley Lab.   …
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Mining Metagenomes for Cas Proteins
… The Science Researchers report the discovery of miniature Clustered Regularly Interspaced Short Palindromic Repeats … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. The sequences were then … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office …
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THE Bioenergy Tree
… The US Department of Energy’s favorite tree is poplar. They’re … trees in the Northern Hemisphere, making them tantalizing plants to harness for bioenergy. In this episode, hear from … who have uncovered remarkable genetic secrets that bring us closer to making poplar an economical and sustainable …
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Creating an Energy Market for Miscanthus
… What grass is a prized ornamental and a bioenergy plant? Meet Miscanthus , an attractive addition to your garden and a potential … competitive in the market, both energy policy and Miscanthus will need some upgrades. In this episode, hear from …
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JGI Workshop at SIMB NP Meeting
… these untapped metabolic capabilities is often tedious and resource intensive. This is often due to, for … DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, has been developing and applying new genomics … that address these issues. Check the scientific program for relevant posters. …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… Studying the  genomes of microorganisms is incredibly useful for understanding the microbiome of the earth, but … To access the genomes of uncultured  microbes , scientists usually employ two different methods; shotgun metagenomic … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… Simon Roux (Cross-field)  Jeremy Schmutz (Cross-field)  Susannah Tringe (Microbiology)  Tanja Woyke (Biology and … authors on a recent study that made the cover of  Nature Reviews Microbiology ,  summarizing insights from three … in  a switchgrass study that delved into the nuances of the plant’s genome . A candidate bioenergy feedstock, …
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Forest Fungi, Seagrass, and a New View of Symbiosis
… to nutrient cycles. Francis Martin and Lucas Auer discuss their work on communities of forest floor fungi. Allison … on the symbiotic relationship between mycorrhizal fungi and plant roots.  …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a link in … genetic material with various origins, ranging from fungi, plants to bacteria. Back in 2011 when these genome and … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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Silver age of GOLD introduces new features
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … scientific discoveries. GOLD’s  public Application Programming Interface allows users to access curated … (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the …
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The Expanding Universe of Methane Metabolisms in Archaea
… insights into an ancient metabolism. Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly available metagenome data … found on early Earth.”  Through the JGI Community Science Program, Inskeep and McKay recovered metagenome-assembled …
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