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Multi 'omics comparison reveals metabolome biochemistry, not microbiome composition or gene expression, corresponds to elevated biogeochemical function in the hyporheic zone
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Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation
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Metagenomic and Metatranscriptomic Analyses Reveal the Structure and Dynamics of a Dechlorinating Community Containing Dehalococcoides mccartyi and Corrinoid-Providing Microorganisms under Cobalamin-Limited Conditions
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Transposon Mutagenesis Paired with Deep Sequencing of Caulobacter crescentus under Uranium Stress Reveals Genes Essential for Detoxification and Stress Tolerance
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New Microviridae isolated from Sulfitobacter reveals two cosmopolitan subfamilies of single-stranded DNA phages infecting marine and terrestrial Alphaproteobacteria
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A One-Stop Shop for Analyzing Algal Genomes
… greater bioeconomy. By bringing together publicly available genomic data on algae into one place, PhycoCosm allows users … sequence and understand. A team of researchers led by Algal Genomics Program lead Igor Grigoriev and data scientist Alan …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… the genomes of two varieties of a close relative and model species. The following year saw the beginnings of common … decades of research, switchgrass has become an important species whose complex genomes are helping breeders … and environments. The long-term investments in both the genomics and gardens are helping these shrubby grasses …
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DAS Tool for Genome Reconstruction from Metagenomes
… changes. Summary Researchers have been utilizing metagenomics as a way to study a collection of hard-to-culture … complexity. The environmental datasets included metagenomic data from Crystal Geyser in Utah (work also done by … more genomes from complex metagenomes than any of the single binning tools alone,” primarily because of its …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to … If you know Joshua Tree, that’s an example of a yucca species. And the cool thing about yuccas is that there are closely related species that use C3 and CAM. ALISON: But plants don’t need …
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Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network
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Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
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Transcriptomics reveal a mechanism of niche defense: two beneficial root endophytes deploy an antimicrobial GH18‐CBM5 chitinase to protect their hosts
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