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Olpidium, The Key to the Origin of Terrestrial Fungi
… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of fungi by James et al. and Sekimoto … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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A Genomic Perspective Across Earth’s Microbiomes Reveals That Genome Size in Archaea and Bacteria Is Linked to Ecosystem Type and Trophic Strategy
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Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep
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Decomposing a San Francisco estuary microbiome using long-read metagenomics reveals species- and strain-level dominance from picoeukaryotes to viruses
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Training the Next Generation of Talent
… DOE JGI, UC Merced Days after presenting the results of his summer research at the U.S. Department of Energy … in the DOE JGI/University of California, Merced Genomics Distinguished Graduate Internship Program. Conceived … both Meza and DOE JGI Director Eddy Rubin. “QSB faculty are active DOE JGI Community Science Program collaborators, and …
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Microbial co-habitation and lateral gene transfer: what transposases can tell us
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A molecular survey of Australian and North American termite genera indicates that vertical inheritance is the primary force shaping termite gut microbiomes
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Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
…   The Science Scientists have fully decoded the genome of an oil-producing green alga, and demonstrated precise … gene targeting in the genome in the November 2025 issue of The Plant Cell. Auxenochlorella is an allodiploid hybrid … specific chemical tags on DNA  to control which genes are active. Researchers also identified transfer RNA genes with …
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Chapter Twelve Genomics for Key Players in the N Cycle From Guinea Pigs to the Next Frontier
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… to global oceans. Through the Community Science Program of the U.S. Department of Energy (DOE) Joint Genome … The JGI’s large-scale call included algal genomics as a focus area, and one of the accepted proposals … George diCenzo of Canada’s Queens University aims a multi-omics approach toward generating “with unprecedented …
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Finding the Fermenters
… BER-funded data resources, researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use … compiled a list of with more than 8,300 organisms from multiple sources, including the U.S. Department of Energy …
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