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Crysten Blaby-Haas
… Dr. Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a partnership … at Berkeley Lab. She is spearheading the development of a joint user capability between the JGI and Molecular … and engineering. She earned her PhD in Microbiology and Cell Science in 2011 from the University of Florida, working …
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Katherine Louie
… where she manages metabolomics production for community sequencing projects and heads R&D efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … techniques, the platform delivers rich metabolite profiles from diverse biological and environmental samples in …
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Webinar: SIP technologies at EMSL and JGI
… Joint Genome Institute (JGI) provide access to a variety of tools that leverage stable isotopes to measure carbon and … The more the better. We want to put at least a microgram of DNA in the tube so you’d need at least 2 micrograms in … go from start to finish, i.e., QC to separation to library sequencing and assembly. Like others, our turnaround time …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… characteristics — creating many different ways of processing nitrogen. To boost crops more efficiently in … Facility located at Berkeley Lab. In addition to providing metagenome mining for computational analysis of the AT … FastTree and identified 62 distinct AT groups. However, no single AT group was conserved across all species — a …
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Gut Fungi: Unexpected Source of Novel Chemicals
… The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest … The team’s research at both the JGI and EMSL was enabled by the Facilities Integrating Collaborations for … of Science National User Facilities , with the stroke of a single proposal. The next step for the team was to try to …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… This is the third and final episode of our series on a giant metagenome assembly from … In the last two episodes, we’ve covered the specialized software and supercomputers behind this project. But every …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Biotechnology! Loretta Spencer served as a manyterm mayor of Huntsville, Alabama and is known for her contributions to … Grimwood is also co-director of the HudsonAlpha Genome Sequencing Center. Grimwood heads the Library Construction … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 …
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Atif Shahab
… Since 2012, Mr. Shahab has led the development of an integrated platform for tracking JGI's sequencing projects and data warehousing. This platform … tracking, and enables efficient analysis and reporting of sequencing projects and their status. Mr. Shahab has …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist … Roux , who was recently selected as the 2025 recipient of the Microbiome Data Prize by the American Society for … (ASM). Roux leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the development of the …
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Better Crops With a Pointillist Approach to Plant Genomics
… In this episode, we peer into plant cells. Researchers are using measurements from single cells to understand which genes help plants grow, get …
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to … on JGI Advisory Committees are outlined in this Code of Conduct. … users and their science including technical capabilities offered, proposal review procedures and the annual meeting. …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… This series is the story of a giant metagenome assembly from Wisconsin’s Lake … — Summit and Frontier — that process terabytes of data with MetaHipMer2. And the National Energy Research …
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