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When “The Blob” Made It Hotter Under the Water
… Data from marine heatwave event may foreshadow climate change impact on … colleagues collected more than 270 water samples. Genomic DNA extracted from the water samples were sequenced by the … carbon and nutrient flux in marine microbial communities. Using the JGI-generated data, Sachia Traving, a former …
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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital resource for data … a broad range of activities from proposal intake to publication. Information is also obtained and cross-checked … U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE …
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month … program manager for  Sustainable Berkeley Lab (SBL). By 2030, Berkeley Lab  aims to cut its greenhouse gas emissions … even before moving to Berkeley, the JGI committed to using Stirling freezers to store samples, which use less …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… Novel archaeal lineage found in Yellowstone may have been … generating thousands to millions of copies of a particular DNA sequence from just a few pieces of DNA. Summary The … with JGI’s help. Additionally, the Marsarchaeota comprise 20-50 percent of the iron-oxide microbial mat communities in …
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Massie S. Ballon
… Massie S. Ballon is the Communications and Outreach Manager … and collaborators.  Ms. Ballon is a molecular biology-trained science communicator with extensive experience shaping compelling narratives for diverse audiences. In her … JGI's Communications and Outreach Manager. Click to see the coverage of JGI-enabled science highlighting user research, …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, … capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based techniques, the … stable isotope probing (SIP) to assess metabolite turnover, DNA-SIP for helping identify active micro-organisms within …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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Expanding Virophage Diversity
… Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages … The U.S. Department of Energy Joint Genome Institute, a DOE Office of … Virophage data on IMG/M data portal …
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Crysten Blaby-Haas
… Dr. Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a … of Florida, working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in … PhD, Microbiology and Cell Science, University of Florida NIH Postdoctoral …
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Benjamin Cole
… Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the … on understanding how microbes can colonize plant roots, focusing on genetic components required for effective … of California, San Diego (PhD, 2011) Rensselaer Polytechnic Institute (B.S., 2006) …
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The More the Merrier: Making the Case for Plant Pan-genomes
… Brachypodium model system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with respect to their genomes. In their base state, they are diploids with two genome … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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JGI-KBase Panel at SACNAS
… Nov. 2: Getting Credit for Scientific Contributions of Any Size What is considered to be a scientific contribution? … Attendees will learn how to identify their contributions using the Contributor Roles Taxonomy and what sorts of …
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