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Holo‐omics disentangle drought response and biotic interactions among plant, endophyte and pathogen
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Label-free structural imaging of plant roots and microbes using third-harmonic generation microscopy
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Massie S. Ballon
… aims to broaden awareness of and access to JGI public resources and the DOE mission, as well as help cultivate the … collaborators.  Ms. Ballon is a molecular biology-trained science communicator with extensive experience shaping … portfolio spans a wide range of topics beyond translating science, including crafting technical reports, developing …
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Draft genome sequence of Marinobacterium rhizophilum CL-YJ9T (DSM 18822T), isolated from the rhizosphere of the coastal tidal-flat plant Suaeda japonica
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How to Target a Microbial Needle within a Community Haystack
… microbes from complex environmental samples. The Science A team led by researchers at the Max Planck … the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast majority of … DNA could be sequenced. Their protocol,  detailed in the journal  Microbiome , combines multiple techniques and was …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a … genetic material with various origins, ranging from fungi, plants to bacteria. Back in 2011 when these genome and … the much more extensive taxonomic and genetic sampling, our study confirmed the affinity between Olpidium and the …
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High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1T (DSM 17521T) isolated from muddy waters of a drainage system in Chandigarh, India
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An Earth Month Look at Sustainability Efforts at the JGI
… Garden Club, hosted a DIY Succulent Workshop and Plant Sale. All year, the JGI helps support finding … for the wider Berkeley Lab. “We’re shifting now to our net-zero strategy. And so we’re looking at the overall greenhouse gas impacts from all of our operations,” said Brie Fulton, program manager for  …
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Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep
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JGI announces first round of 2023 New Investigator awardees
… The JGI is eager to work and share our tools with a widening circle of researchers. The JGI is eager to work and share our tools with a widening circle of researchers. That’s why … —  through the  New Investigator call under our Community Science Program.  Below find a list of the first 10 …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental ch … reason for studying rumen: Livestock live off plant matter, and their rumen are highly capable of breaking …
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An Addiction Crucial to a Fungus’ Reproduction
… regulate key components of its reproductive machinery The Science To better understand how beneficial organisms … endobacteria, the Rhizopus fungus cannot act as a plant pathogen, it cannot reproduce asexually, and … As these oil-producing fungi are potential sustainable sources of alternative fuels, so understanding …
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