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… can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing … uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced … to recover the genomes of these viruses and associate them with their microbial hosts. However, assembling viral …

… in early Earth conditions. The Science Through a combination of sequencing tools and techniques applied to samples … and characterized a novel phylum-level lineage of archaea with at least two major subgroups dubbed Marsarchaeota. The … into the evolution of life on Earth. For decades, longtime JGI collaborator Bill Inskeep of Montana State University …

… P. psychrophila genes drive resilience when salinity fluctuates. The Science The Arctic microalga Plocamiomonas … of quantity and thickness. Replacing older, thicker ice with younger, thinner ice means more fresh water — and less … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… Antarctic lakes, some of which have salinities 10 times that of seawater. To shed light on the global biogeography in … on Antarctica distinct and unique. In collaboration with the DOE Joint Genome Institute, a DOE Office of Science … applications. The work has been enabled through the JGI Community Science Program (CSP) . Cavicchioli and his …

… ancestral and present-day plants The Science In a recent  Nature Genetics paper , researchers focused on the full … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … a resource that associates plant’s genetic variants with specific adaptation mechanisms they had identified. For …

… Meta-omics datasets show that CRISPR-Cas systems determine mutualism or … some archaeal hosts and their hitchhikers. The Science Within the archaeal domain, there is a group of tiny … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… Data from marine heatwave event may foreshadow climate change … carbon from the atmosphere and keeps it in the deep ocean. With genomic samples collected before, during and after The … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… dry rot Serpula lacrymans adapted to a new ecological habitat. The Science By comparing genetic information from … from Europe, that was sequenced and analyzed by the JGI. The researchers found that S. lacrymans var. lacrymans … to see how the Serpula fungi have adapted in an environment with little to no competitors for resources. On wood blocks …

… A fungus relies on bacteria to regulate key components of its reproductive machinery The Science … researchers investigated the role that bacteria living within a host (endosymbionts) have on fungal host … and experimented with the fungi and bacteria, while the DOE JGI team sequenced and annotated a host genome (Rm ATCC …

… and fungi The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial communities, with results published in the  November 2022 issue … HT-SIP is a capability available to request through  the JGI proposal calls . …

… described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of … inside the host’s genome, living quietly and replicating with their host indefinitely. Now, in studying a microbial … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… from metagenomics to single-cell work — have quickly accelerated understanding of giant viruses. The Science In the last … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … One way of detecting giant viruses in sequence data is read-mapping: using giant virus reference genomes to search for …