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Enrichment of root-associated Streptomyces strains in response to drought is driven by diverse functional traits and does not predict beneficial effects on plant growth
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The Mutualist Laccaria bicolor Expresses a Core Gene Regulon During the Colonization of Diverse Host Plants and a Variable Regulon to Counteract Host-Specific Defenses.
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Diverse and unconventional methanogens, methanotrophs, and methylotrophs in metagenome-assembled genomes from subsurface sediments of the Slate River floodplain, Crested Butte, CO, USA.
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Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages
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John Vogel
… years where he was a driving force behind the development of numerous genomic resources that fostered the widespread … sequenced mutant collections, transformation technology, epigenetic analysis techniques) and utilizing these resources … and the mechanisms by which plants interact with their microbiomes. In addition, his group conducts comparative …
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Natural Prodcast Episode 22: Alison Narayan
… Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … made it onto our list is because we wanted to have diversity. And so we wanted a profile across that protein … could have arisen from. DAN UDWARY: OK, so sort of a phylogenetic reconstruction kind of a thing. ALISON NARAYAN: …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that … annotating and analyzing the genome in order to find the genetic traits responsible for  P. trifoliata ’s hardiness, … Fred Gmitter, a UF/IFAS professor of citrus breeding genetics and longtime JGI collaborator, are senior authors …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… JGI-led team significantly expands the global diversity of large and giant viruses. While the microbes in a single … expanded 10-fold from just 205 genomes, redefining the phylogenetic tree of giant viruses. Metabolic Reprogramming a … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… Hugh Cross; [Below] Zac Freedman, Martin Jonikas, Lotus Lofgren, Fumito Maruyama, Lauren Stadler, Tingting Xiang and … enzymes discovered in extreme environments to engineered microbiomes that accelerate biomass processing. This year’s … the research consortium aims to generate over a terabase of sequence. “We are thrilled to support this year’s CSP …
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Secreted Effector Proteins of the Poplar Leaf Spot and Stem Canker Pathogen Sphaerulina musiva Manipulate Plant Immunity and Contribute to Virulence in Diverse Ways.
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Genomic analysis of 94 SEMIA strains isolated from common bean nodules: species diversity and genes related to nodulation, nitrogen fixation, and tryptophan metabolism
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Gut Fungi: Unexpected Source of Novel Chemicals
… The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest … fungi synthesize molecules that are sources of new chemical diversity; the team identified what looked to be three … fungal natural products, O’Malley and her team plan to use genetic tools to boost production and isolate the compounds. …
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