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… at the University of California, Davis and UC Santa Barbara generated a list of prokaryotes with fermentative metabolism … IMG data portals to get information about the genomes and genes of the organisms on the list. They also searched IMG/M for all protein-coding genes belonging to each genome. The final dataset – …

Clustering Scalable … Cataloging Lineage Specific Conserved Genes in Giant Viruses … Pan-genome Graphs: Approaches for …

… traits — height, biomass, hardiness to cold, etc. — to its genes. The undertaking took shovels, trucks — and more than …

… contains about 6% of the human genome . They discovered genes linked to conditions such as cardiovascular disease, … about 2% of the human genome. They were interested in genes involved in repair of DNA damage, and those associated … 3% of the human genome. They wanted to learn about the genes implicated in the development of breast and prostate …

… they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across …

JGI data portals and pipelines helped identify potential genes responsible for lignin deconstruction. (The JGI also … structure and functionality on the atomic level, was generated at JBEI and analyzed by the GLBRC. By providing … will require further research, including confirming the genes and the enzymes those genes produce. If confirmed, and …

… stresses, and its transcriptome to learn more about which genes expression patterns. The analysis led to the … identification of several transcription factor regulating genes and enzymes that can modify composition of algal …

… 2007, the JGI has been working on identifying switchgrass genes related to biomass production, drought tolerance, and … data portal Phytozome. The combination of field data and genetic information has allowed the research team to … Switchgrass has a large polyploid genome, which means most genes are found as multiple copies across the chromosomes. …

… and a specific microbial host to replicate. Sequencing genetic material directly from samples sidesteps these … key aspect of viruses in the environment — their sheer genetic diversity. As pioneers of this field, the JGI has … genomes. That study multiplied the number of known viral genes by a factor of 16. The same year, the JGI expanded its …

… each variety stores sugars and sequesters carbon. 2015: Epigenetic Control of Drought Tolerance in Sorghum (EPICON) … over 50 other diverse sorghum genomes. Deep sequencing and genetic linkage analysis improve the genome’s accuracy, and … team collect diverse lines of sorghum to understand what genes exist across the species. Earlier pan-genomes for …

… of Missouri said he and his colleagues had identified 1,110 genes involved in lipid metabolism.  “There’s still a lot of … progress had already been made positionally cloning genes involved in agronomic traits related to nutritional … “All along the way, it was just like rediscovering genetics, with the evolution of sequencing technologies and …

This year’s annual CSP call had five areas of emphasis: genes to function, plant and algal functional genomics, …