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Gotta Catch 'Em Gall
Kasey Markel and Patrick Shih (UC Berkeley and the Joint BioEnergy Institute) are looking for new ways to engineer plants. So … In this episode, hear from Kasey and Patrick about how this project unfolded, and how they worked with the JGI's …
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Eelgrass Proves to Be Much Younger Than We Thought
The Science Eelgrass, one of the most abundant plants in the ocean, originated in Japan before spreading around … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley … 502951, 2016, Population and evolutionary genomics of host–microbiome interactions in Zostera marina and other …
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A Community Resource for Secondary Metabolite Researchers
Collaboratory encourages user engagement. The Science In addition to the core set of "primary … specific features or tools. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as IMG-ABC. That portal …
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JGI-KBase Panel at SACNAS
Nov. 2: Getting Credit for Scientific Contributions of Any Size What is … get credit for their contributions to science. A panel of DOE researchers, program managers, and intern alumni will … how to identify their contributions using the Contributor Roles Taxonomy and what sorts of platforms researchers use …
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Viruses Reprogram Cells into Different Virocells
Microbial cells infected by viruses undergo metabolic reprogramming. The … science initiative between the  U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … and Environmental Research in one proposed research project. For this project, RNA sequencing was done by the …
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The endosymbiotic box of protective tricks
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JGI-UC Merced Interns Share Their 2021 Experiences
During the summer of 2021, 13 interns from UC Merced spent … virtually with JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate … Transcriptomes of Rice and Arabidopsis Roots … Making Big Data Metagenomic Clustering Scalable … Cataloging Lineage …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
On July 30, UC Merced students and their JGI mentors toasted to the end of a nine-week virtual internship. The celebration was preceded by … one JGI mentor. Together, they work through a specific project that aligns with each intern’s interests or …
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Better Genome Editing for Bioenergy
… part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a … felling their research problem: at a genetic level, how does  Y. lipolytica work? The project was a multi-institutional effort led by …
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Corals in Hot Water Get Help From Their Microbes
As waters warm due to climate change, corals are in mortal peril. But corals comprise multiple organisms: a … a photosynthetic microalgae, and a little-characterized microbiome. When warm waters stress corals, it might be their microbes, including their photosynthetic partner, that help them take …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology … (HudsonAlpha), and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … to climate shifts. Changes in ploidy might play a key role in this response. Generating additional genomic …
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Back to the Future! A Sorghum Story
You might know sorghum as an edible grain. But there are some sorghum varieties, grown on marginal land with little water, which were developed … sorghum’s historical — and literal — roots could play a big role in our energy future. …
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