Results

Detection of S83V GyrA mutation in quinolone-resistant Shewanella algae using comparative genomics
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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Construction of Viable Soil Defined Media Using Quantitative Metabolomics Analysis of Soil Metabolites
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Grasses use an alternatively wired bHLH transcription factor network to establish stomatal identity
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Bidirectional titration of yeast gene expression using a pooled CRISPR guide RNA approach
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Salinity tolerance mechanisms of an Arctic Pelagophyte using comparative transcriptomic and gene expression analysis
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Methanolobus use unspecific methyltransferases to produce methane from dimethylsulphide in Baltic Sea sediments
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Root-associated bacterial communities and root metabolite composition are linked to nitrogen use efficiency in sorghum
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Providing biological context for GWAS results using eQTL regulatory and co‐expression networks in Populus
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Neha Varghese
… interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user science and projects through implementation of advanced …
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Accelerating Metagenomics Discoveries with Deep Learning
… workshop, Volkan Sevim, a computational biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), … that low sequence identity may belie. The technology he’s using is magical; transform any length of amino acid sequence into a smaller, constant-length vector using deep learning. Vector representations allow homology …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… This single environmental trigger highlights efficiency for users requiring multiple omics methods to examine microbial … support the DOE’s Biological and Environmental Research program’s efforts in advancing genome-based biotechnology. … (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the …
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