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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… for the global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released … vision, an updated mission statement for the user facility sets out to support the global research community with … improving connectivity across the DOE data ecosystem, building and harnessing partnerships, enhancing the JGI’s …
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Extracting the Secrets of Secondary Metabolites
CRAGE-CRISPR combo helps further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, … for survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and …
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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Igor Grigoriev
… at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of … Ye et al (2022) The role of zinc in the adaptive evolution of polar phytoplankton.  Nature Ecol Evol . … … Fungal & Algal Science Program … Education … Selected Publications … Awards and Service …
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Boosting Small Molecule Production in Super “Soup”
… still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have … ways to accelerate bio-design and identifying the best sets of enzymes that enable synthesis of sustainable … (BDO). To do so, the yeasts received fine-tuning of gene expression through genetic rewiring with CRISPR-Cas9 …
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JGI-UC Merced Interns Share Their 2021 Experiences
During the summer of 2021, 13 interns from UC Merced spent eight weeks working … Phages … Polymorphisms Created by Transposable Elements … Evolution of the Mitochondria Internship … Cross Species … Clustering Scalable … Cataloging Lineage Specific Conserved Genes in Giant Viruses … Pan-genome Graphs: Approaches for …
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Three Join the JGI User Executive Committee
… three new members earlier this month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of … of the University of California, Santa Barbara. They join eight other JGI users already serving on the UEC – go … is an Assistant Professor in the Department of Ecology, Evolution and Marine Biology at UCSB, where she leads a …
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Deciphering the molecular components of the quorum sensing system in the fungus Ophiostoma piceae
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate … change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less fertilizer. For millions of … interaction up close, using RNA sequencing to understand gene expression: one of the first cross-kingdom …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate … change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less fertilizer. For millions of … interaction up close, using RNA sequencing to understand gene expression: one of the first cross-kingdom …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
A special issue of Synthetic Biology celebrates research enabled by the JGI … Fashioning DNA outside a cell is key to interrogating what genes do, how they work, and applying them to environmental … more than 10 papers, including two Nature Plants publications, in five years, have come out of the …
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Clarence Le
… researcher who identifies and analyzes novel clades of RNA viruses and determines novel viral gene functions that may impact hosts and host populations. …
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