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Tracing the Evolution of Shiitake Mushrooms
… the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name from the … enzymes these fungi use to break down wood, and compares genetic diversity between cultivated and wild shiitake … atmospheric carbon dioxide.  Summary Researchers sequenced 11 samples from Asia–Australasia and 13 samples from the …
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Bioenergy sorghum stem density increases threefold following internode elongation due to continued accumulation of lignified cell walls and complex regulation of genes involved in cell wall biosynthesis
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… Novel archaeal lineage found in Yellowstone may have been … chain reaction technology that enables researchers to generating thousands to millions of copies of a particular … locations to thoroughly characterize the archaeal lineage, information that they believe will lend insights into …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… Puerto Nuevo is a small town along the Baja California coastline in Mexico. … Nuevo is, historically, a fishing town and we know little about its coastal microbial ecology. We also know little … (and cone snails in general) outside of mostly anecdotal information,” Ul-Hasan noted. “I spent a good portion of …
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Atif Shahab
… Since 2012, Mr. Shahab has led the development of an integrated platform for … This platform streamlines project management, laboratory information tracking, and enables efficient analysis and … status. Mr. Shahab has extensive experience in Laboratory Information Management Systems (LIMS), bioinformatics, and …
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JGI Announces 2025 New Investigator Portfolio
… Pictured from left: [Top] Bill J. Baker, Jeff Barrick, Ian Gilman, Louis Graf, Yuxi Guo, … in the November 2025 review. You can also find more information about the JGI’s  various proposal calls here. …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … portal Phytozome. The combination of field data and genetic information has allowed the research team to associate … At the 2021 JGI Annual Meeting, David Lowry talked about a multi-year study his student conducted involving …
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Mapping the Earth’s Hidden Fungal Kingdom
… Leveraging massive comparative genomics to decode millions of … and ancient origins, fungi remain largely mysterious. Only about 200,000 fungal species have been named. Among those … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations …
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Crysten Blaby-Haas
… Dr. Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular … She earned her PhD in Microbiology and Cell Science in 2011 from the University of Florida, working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging molecular biology …
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A Complex Confection Decoded: Sugarcane Reference Genome
… Sugarcane was the last major crop without a reference quality … in  Nature by an international consortium. With the genetic code of sugarcane, researchers were able to map the … sugarcane  genome , the JGI provides foundational genetic information that crop breeders can use to improve sugarcane …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… Gardeners and farmers around the country recognize that crop … to customize the crop for additional end products. The genetic diversity within this set of plants, each with a … of interest.” The combination of field data and genetic information has allowed the research team to associate …
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JGI Hosts GPU Hackathon in May
… WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical … scroll down to the Team Proposal tab to submit. For more information about the 2019 GPU Hackathons, go to:  … Oakridge National Laboratory Hackathon … From our partners …
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