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Dan Rokhsar
… JGI in 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards the sequencing, annotation, and analysis of three human chromosomes. After … AB in Physics, Princeton University, NJ MS in Theoretical Physics, Cornell …
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Compendium of Metabolomic and Genomic Datasets for Cyanobacteria: Mined the Gap
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Viruses Reprogram Cells into Different Virocells
… Microbial cells infected by viruses undergo metabolic … But if the duck gets infected by a virus so that it no longer looks or quacks like one, is it still a duck? For a … microbes, the answer is no. They refer to the infected microbial cells as virocells, a change in name first …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… As SIP experiments shed more light on microbial communities than ever before — especially with … opened vast windows into specific activities catalyzed by microbial communities. By pairing RNA or DNA sequencing with … of Science User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Congratulations to US Department of Energy (DOE) Joint Genome … and management best practices that have advanced the microbial sciences. The Prize also recognizes innovative and … has changed our understanding of the microbiome and the microbial sciences field. Roux will be recognized at the …
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Expanding Virophage Diversity
… DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages are small viruses with … DNA genomes that co-infect eukaryotic cells along with giant viruses. Almost all known virophage genomes … available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which …
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IMG Webinar Series
… Find a series of webinars related to our Integrated Microbial Genomics & Microbiomes portal. …
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DAS Tool for Genome Reconstruction from Metagenomes
… Program (ETOP) , researchers have developed and improved upon a tool that combines existing DNA sequence binning … genomes, particularly from incredibly complex soil microbial communities, is crucial to understanding how these … improving methods for isolating and characterizing entire microbial genomes from sequences generated from …
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… bioenergy security for a steadily growing worldwide population. Anuvia Plant Nutrients , a small Florida business producing bio-based plant nutrition products that target soil enrichment, is partnering with … of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), to help drive discoveries …
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JGI Accepts 17 Proposals for Community Science Program
… Monitoring Inter-Organism Interactions Within Ecosystems … State University and colleagues are interested in the microbial communities that live on Alaska’s glacially … public agricultural research corporation, is focused on microbial interactions on the Amazon forest floor. Alicia …
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Tina Clarke
… joined the Lab in 2007 as the Sr. Human Resources Division Partner for the Joint BioEnergy Institute (JBEI) and in … (JGI). Tina serves in an HR advisory role to Division/Area management and supervisors to recommend solutions and appropriate actions on diverse HR related matters. …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately facilitates microbial genome discoveries. Unlocking the intricate … analyze but also create DNA sequences mimicking an array of microbial life. By leveraging massive user-generated … of Science User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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