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… efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … spectrometry workflows for polar and nonpolar metabolite analysis, creation of large metabolite databases by running … standards, and development of high-throughput untargeted analysis pipelines.  Beyond profiling over 10k samples/year, …

… well ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly simple: place these … bioenergy feedstocks, algae are tiny but mighty. An analysis in the 2017 Bioeconomy Report estimated that the … in Igor Grigoriev’s team at the JGI led the multi-omics analysis effort for a more complete picture. The team …

… begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, … fungi, bacteria and viruses survive. With this metagenomic analysis, it was possible to identify specific attributes — … microbes in burned soils had in common.  To complete this analysis, a multi-institutional team of researchers …

… before. In 2006, the JGI produced 33 billion base pairs of sequence; by 2023, that number was almost 717 trillion. … also collaborated to advance computing infrastructure and analysis. This way, JGI users — both primary, … researchers high-powered tools for large-scale assembly and analysis.   To put these efforts into perspective, we caught …

… Mateus’s research is focusing on the identification and analysis of Mobile Genetic Elements from Metagenomic Data.  Mateus’s …

… The Impact The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in environmental processes (related to interactions of soil-sediment environments, water and air-atmosphere with … global carbon cycle. The JGI is sequencing large numbers of microbes and microbial communities that contribute to …

… Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … Honey bees are invaluable pollinators — cupids of the plant world facilitating the remixing of genes in the … that interested the authors was that an evolutionary analysis of  Bifidobacterium strains in honey bees and …

… gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key role in determining the composition of the Earth’s atmosphere and regulating the global climate … from a variety of environments, as well as tools for analysis. “There is evidence that methanogenesis is one of …

… collaborators. This work combines custom flow cytometric analysis, cell sorting, genome amplification, PCR screening, … novel flow cytometry protocols for targeted recovery of specific microbes. …

… During the summer of 2021, 13 interns from UC Merced spent eight weeks working … hone science presentation skills, and participate in professional development enrichment activities. For some … Merced internship program was founded in 2014 with the goal of inspiring students to embark on a career in genomics and …

… Jasmyn provides bioinformatics tools and analysis support for user science, with a focus on …