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2023 Progress Report
… Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, large-scale data, and professional expertise to support the global … complex biological and environmental systems. We optimize our service to the community through responsibly managing …
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How Filamentous Fungi Sense Food
… networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the University of … importantly, when faced with a veritable buffet of carbon sources, these fungi detect which complex chains are … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… viral genome found in the deep subsurface ecosystem. The Science Altiarchaea are carbon-fixing microbes and targets … releasing fresh organic carbon which can serve as a food source for other microbes into the environment. Summary In J. … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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The genome sequence of Bifidobacterium longum subsp. infantis reveals adaptations for milk utilization within the infant microbiome
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Identification of beneficial and detrimental bacteria impacting sorghum responses to drought using multi-scale and multi-system microbiome comparisons
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Metagenomics-resolved genomics provides novel insights into chitin turnover, metabolic specialization, and niche partitioning in the octocoral microbiome
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Draft Metagenome Sequences of the Sphagnum (Peat Moss) Microbiome from Ambient and Warmed Environments across Europe
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Water aging and the quality of organic carbon sources drive niche partitioning of the active bathypelagic prokaryotic microbiome
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… for developing ​​bio-based industrial products.    The Science Scientists have fully decoded the genome of an oil-producing … resilience and diversifying industrial feedstock sources. … was supported by the Department of Energy (DOE) Office of Science, Biological and Environmental Research program under …
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A Complex Confection Decoded: Sugarcane Reference Genome
… can work toward advancing sugarcane biotechnology. The Science Considered the world’s most harvested crop by … The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information that crop … cultivar R570 has been generated and  reported in the journal  Nature . The work led by researchers at Australia’s …
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An Addiction Crucial to a Fungus’ Reproduction
… regulate key components of its reproductive machinery The Science To better understand how beneficial organisms … effort led by researchers at Cornell University and scientists at the Joint Genome Institute, a DOE Office of … As these oil-producing fungi are potential sustainable sources of alternative fuels, so understanding …
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Busting the Unbreakable Lignin
… fungi can degrade the hardiest of plant components   The Science There are three main ingredients to tackle when it … yield fuels, and removing lignin in order to do so is a resource-intensive process. Now, a new study shows how … Research Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential …
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