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… Mukhopadhyay and Steve Singer are harnessing the versatile bacterium Pseudomonas putida to break down biomass and … a more sustainable, biobased economy. They conduct research at the Joint BioEnergy Institute (JBEI) , a JGI partner and one of the four US Department of Energy …

… in Mexico. While conducting early field studies related to her thesis on cone snails, UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the …

… And Trina McMahon's lab has been sampling the microbes of that lake for over 20 years, to understand how the freshwater ecosystem works.  So a few years ago, when they set out … to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes are the …

… Registration has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics … workshop is designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and …

…   For years, researchers have known that many datasets miss a key part of microbial genomes: the mobile … Bagby (Case Western Reserve University) and Simon Roux (JGI) as they talk about their recent work on a time series …

… Back in 2011, JGI-supported researchers published a paper in the journal … metagenomics to identify over 27,000 microbial genes. The data from that study is now used across California State University …

… from Wisconsin’s Lake Mendota. In this episode: a look at the supercomputing that stitches together large datasets with the assembler … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running …

… Populations of Antarctic lake microbial communities change with … to nutrient cycling in polar regions. While microbial populations in other Antarctic lakes and the nearby Southern … Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published …

… RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory protein. … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… (Clustered Regularly Interspaced Short Palindromic Repeats) is the leading tool for accurately editing genomes, its effectiveness has historically … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to … metabolites"—chemical compounds shared by most living creatures for energy, growth and reproduction—most organisms … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, researchers demonstrated that a new genetic mapping strategy called RH-Seq can … Genomics Project led by the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility of Lawrence …